Gene : AUR62014110 C. quinoa v1.0
Defline:  (1 of 3) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  179
Name:  ? AUR62014110 Secondary Identifier:  ? PAC:36309024
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62014110 0.5kb upstream 0.5kb upstream 17984 true C_Quinoa_Scaffold_3035: 4172755-4190738 Chenopodium quinoa
AUR62014110 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3035: 4172755-4173254 Chenopodium quinoa
AUR62014110 0.5kb downstream 0.5kb downstream 17984 true C_Quinoa_Scaffold_3035: 4173255-4191238 Chenopodium quinoa
AUR62014110 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3035: 4190739-4191238 Chenopodium quinoa
AUR62014110 1.0kb upstream 1.0kb upstream 18484 true C_Quinoa_Scaffold_3035: 4172255-4190738 Chenopodium quinoa
AUR62014110 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3035: 4172255-4173254 Chenopodium quinoa
AUR62014110 1.0kb downstream 1.0kb downstream 18484 true C_Quinoa_Scaffold_3035: 4173255-4191738 Chenopodium quinoa
AUR62014110 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3035: 4190739-4191738 Chenopodium quinoa
AUR62014110 2.0kb upstream 2.0kb upstream 19484 true C_Quinoa_Scaffold_3035: 4171255-4190738 Chenopodium quinoa
AUR62014110 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3035: 4171255-4173254 Chenopodium quinoa
AUR62014110 2.0kb downstream 2.0kb downstream 19484 true C_Quinoa_Scaffold_3035: 4173255-4192738 Chenopodium quinoa
AUR62014110 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3035: 4190739-4192738 Chenopodium quinoa
AUR62014110 5.0kb upstream 5.0kb upstream 22484 true C_Quinoa_Scaffold_3035: 4168255-4190738 Chenopodium quinoa
AUR62014110 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3035: 4168255-4173254 Chenopodium quinoa
AUR62014110 5.0kb downstream 5.0kb downstream 22484 true C_Quinoa_Scaffold_3035: 4173255-4195738 Chenopodium quinoa
AUR62014110 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3035: 4190739-4195738 Chenopodium quinoa
AUR62014110 10.0kb upstream 10.0kb upstream 27484 true C_Quinoa_Scaffold_3035: 4163255-4190738 Chenopodium quinoa
AUR62014110 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3035: 4163255-4173254 Chenopodium quinoa
AUR62014110 10.0kb downstream 10.0kb downstream 27484 true C_Quinoa_Scaffold_3035: 4173255-4200738 Chenopodium quinoa
AUR62014110 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3035: 4190739-4200738 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain