Gene : AUR62008939 C. quinoa v1.0
Defline:  (1 of 2) PTHR31209//PTHR31209:SF0 - FAMILY NOT NAMED // COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  384
Name:  ? AUR62008939 Secondary Identifier:  ? PAC:36315068
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa GLUCONEO-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-1042 Chenopodium quinoa pathologic  
Cquinoa PWY-5464 Chenopodium quinoa pathologic  
Cquinoa PWY-5723 Chenopodium quinoa pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62008939 0.5kb upstream 0.5kb upstream 4876 true C_Quinoa_Scaffold_1710: 8069125-8074000 Chenopodium quinoa
AUR62008939 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1710: 8069125-8069624 Chenopodium quinoa
AUR62008939 0.5kb downstream 0.5kb downstream 4876 true C_Quinoa_Scaffold_1710: 8069625-8074500 Chenopodium quinoa
AUR62008939 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1710: 8074001-8074500 Chenopodium quinoa
AUR62008939 1.0kb upstream 1.0kb upstream 5376 true C_Quinoa_Scaffold_1710: 8068625-8074000 Chenopodium quinoa
AUR62008939 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1710: 8068625-8069624 Chenopodium quinoa
AUR62008939 1.0kb downstream 1.0kb downstream 5376 true C_Quinoa_Scaffold_1710: 8069625-8075000 Chenopodium quinoa
AUR62008939 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1710: 8074001-8075000 Chenopodium quinoa
AUR62008939 2.0kb upstream 2.0kb upstream 6376 true C_Quinoa_Scaffold_1710: 8067625-8074000 Chenopodium quinoa
AUR62008939 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1710: 8067625-8069624 Chenopodium quinoa
AUR62008939 2.0kb downstream 2.0kb downstream 6376 true C_Quinoa_Scaffold_1710: 8069625-8076000 Chenopodium quinoa
AUR62008939 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1710: 8074001-8076000 Chenopodium quinoa
AUR62008939 5.0kb upstream 5.0kb upstream 9376 true C_Quinoa_Scaffold_1710: 8064625-8074000 Chenopodium quinoa
AUR62008939 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1710: 8064625-8069624 Chenopodium quinoa
AUR62008939 5.0kb downstream 5.0kb downstream 9376 true C_Quinoa_Scaffold_1710: 8069625-8079000 Chenopodium quinoa
AUR62008939 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1710: 8074001-8079000 Chenopodium quinoa
AUR62008939 10.0kb upstream 10.0kb upstream 14376 true C_Quinoa_Scaffold_1710: 8059625-8074000 Chenopodium quinoa
AUR62008939 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1710: 8059625-8069624 Chenopodium quinoa
AUR62008939 10.0kb downstream 10.0kb downstream 14376 true C_Quinoa_Scaffold_1710: 8069625-8084000 Chenopodium quinoa
AUR62008939 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1710: 8074001-8084000 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain