Gene : AUR62000180 C. quinoa v1.0
Defline:  (1 of 3) PF00153//PF00415//PF01363//PF08381//PF13713//PF16627 - Mitochondrial carrier protein (Mito_carr) // Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) // Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) // Unstructured region between BRX_N and BRX domain (BRX_assoc) Genomic Order:  180
Name:  ? AUR62000180 Secondary Identifier:  ? PAC:36299016
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62000180 0.5kb upstream 0.5kb upstream 7398 true C_Quinoa_Scaffold_2088: 1942925-1950322 Chenopodium quinoa
AUR62000180 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2088: 1949823-1950322 Chenopodium quinoa
AUR62000180 0.5kb downstream 0.5kb downstream 7398 true C_Quinoa_Scaffold_2088: 1942425-1949822 Chenopodium quinoa
AUR62000180 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2088: 1942425-1942924 Chenopodium quinoa
AUR62000180 1.0kb upstream 1.0kb upstream 7898 true C_Quinoa_Scaffold_2088: 1942925-1950822 Chenopodium quinoa
AUR62000180 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2088: 1949823-1950822 Chenopodium quinoa
AUR62000180 1.0kb downstream 1.0kb downstream 7898 true C_Quinoa_Scaffold_2088: 1941925-1949822 Chenopodium quinoa
AUR62000180 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2088: 1941925-1942924 Chenopodium quinoa
AUR62000180 2.0kb upstream 2.0kb upstream 8898 true C_Quinoa_Scaffold_2088: 1942925-1951822 Chenopodium quinoa
AUR62000180 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2088: 1949823-1951822 Chenopodium quinoa
AUR62000180 2.0kb downstream 2.0kb downstream 8898 true C_Quinoa_Scaffold_2088: 1940925-1949822 Chenopodium quinoa
AUR62000180 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2088: 1940925-1942924 Chenopodium quinoa
AUR62000180 5.0kb upstream 5.0kb upstream 11898 true C_Quinoa_Scaffold_2088: 1942925-1954822 Chenopodium quinoa
AUR62000180 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2088: 1949823-1954822 Chenopodium quinoa
AUR62000180 5.0kb downstream 5.0kb downstream 11898 true C_Quinoa_Scaffold_2088: 1937925-1949822 Chenopodium quinoa
AUR62000180 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2088: 1937925-1942924 Chenopodium quinoa
AUR62000180 10.0kb upstream 10.0kb upstream 16898 true C_Quinoa_Scaffold_2088: 1942925-1959822 Chenopodium quinoa
AUR62000180 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2088: 1949823-1959822 Chenopodium quinoa
AUR62000180 10.0kb downstream 10.0kb downstream 16898 true C_Quinoa_Scaffold_2088: 1932925-1949822 Chenopodium quinoa
AUR62000180 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2088: 1932925-1942924 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123743329 5271 Pentapetalae View MSA
122789808 5272 Eudicot View MSA
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain