Gene : AUR62016160 C. quinoa v1.0

Defline:  (1 of 3) K14546 - U3 small nucleolar RNA-associated protein 5 (UTP5, WDR43) Genomic Order:  218
Name:  ? AUR62016160 Secondary Identifier:  ? PAC:36288648

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62016160 0.5kb upstream 0.5kb upstream 9461 true C_Quinoa_Scaffold_3256: 2410997-2420457 Chenopodium quinoa
AUR62016160 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3256: 2419958-2420457 Chenopodium quinoa
AUR62016160 0.5kb downstream 0.5kb downstream 9461 true C_Quinoa_Scaffold_3256: 2410497-2419957 Chenopodium quinoa
AUR62016160 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3256: 2410497-2410996 Chenopodium quinoa
AUR62016160 1.0kb upstream 1.0kb upstream 9961 true C_Quinoa_Scaffold_3256: 2410997-2420957 Chenopodium quinoa
AUR62016160 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3256: 2419958-2420957 Chenopodium quinoa
AUR62016160 1.0kb downstream 1.0kb downstream 9961 true C_Quinoa_Scaffold_3256: 2409997-2419957 Chenopodium quinoa
AUR62016160 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3256: 2409997-2410996 Chenopodium quinoa
AUR62016160 2.0kb upstream 2.0kb upstream 10961 true C_Quinoa_Scaffold_3256: 2410997-2421957 Chenopodium quinoa
AUR62016160 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3256: 2419958-2421957 Chenopodium quinoa
AUR62016160 2.0kb downstream 2.0kb downstream 10961 true C_Quinoa_Scaffold_3256: 2408997-2419957 Chenopodium quinoa
AUR62016160 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3256: 2408997-2410996 Chenopodium quinoa
AUR62016160 5.0kb upstream 5.0kb upstream 13961 true C_Quinoa_Scaffold_3256: 2410997-2424957 Chenopodium quinoa
AUR62016160 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3256: 2419958-2424957 Chenopodium quinoa
AUR62016160 5.0kb downstream 5.0kb downstream 13961 true C_Quinoa_Scaffold_3256: 2405997-2419957 Chenopodium quinoa
AUR62016160 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3256: 2405997-2410996 Chenopodium quinoa
AUR62016160 10.0kb upstream 10.0kb upstream 18961 true C_Quinoa_Scaffold_3256: 2410997-2429957 Chenopodium quinoa
AUR62016160 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3256: 2419958-2429957 Chenopodium quinoa
AUR62016160 10.0kb downstream 10.0kb downstream 18961 true C_Quinoa_Scaffold_3256: 2400997-2419957 Chenopodium quinoa
AUR62016160 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3256: 2400997-2410996 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123736466 5271 Pentapetalae View MSA
122792300 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain