Gene : AUR62012953 C. quinoa v1.0
Defline:  (1 of 1) PF00153//PF01411//PF07973 - Mitochondrial carrier protein (Mito_carr) // tRNA synthetases class II (A) (tRNA-synt_2c) // Threonyl and Alanyl tRNA synthetase second additional domain (tRNA_SAD) Genomic Order:  79
Name:  ? AUR62012953 Secondary Identifier:  ? PAC:36300226
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62012953 0.5kb upstream 0.5kb upstream 6462 true C_Quinoa_Scaffold_1040: 788825-795286 Chenopodium quinoa
AUR62012953 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1040: 794787-795286 Chenopodium quinoa
AUR62012953 0.5kb downstream 0.5kb downstream 6462 true C_Quinoa_Scaffold_1040: 788325-794786 Chenopodium quinoa
AUR62012953 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1040: 788325-788824 Chenopodium quinoa
AUR62012953 1.0kb upstream 1.0kb upstream 6962 true C_Quinoa_Scaffold_1040: 788825-795786 Chenopodium quinoa
AUR62012953 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1040: 794787-795786 Chenopodium quinoa
AUR62012953 1.0kb downstream 1.0kb downstream 6962 true C_Quinoa_Scaffold_1040: 787825-794786 Chenopodium quinoa
AUR62012953 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1040: 787825-788824 Chenopodium quinoa
AUR62012953 2.0kb upstream 2.0kb upstream 7962 true C_Quinoa_Scaffold_1040: 788825-796786 Chenopodium quinoa
AUR62012953 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1040: 794787-796786 Chenopodium quinoa
AUR62012953 2.0kb downstream 2.0kb downstream 7962 true C_Quinoa_Scaffold_1040: 786825-794786 Chenopodium quinoa
AUR62012953 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1040: 786825-788824 Chenopodium quinoa
AUR62012953 5.0kb upstream 5.0kb upstream 10962 true C_Quinoa_Scaffold_1040: 788825-799786 Chenopodium quinoa
AUR62012953 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1040: 794787-799786 Chenopodium quinoa
AUR62012953 5.0kb downstream 5.0kb downstream 10962 true C_Quinoa_Scaffold_1040: 783825-794786 Chenopodium quinoa
AUR62012953 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1040: 783825-788824 Chenopodium quinoa
AUR62012953 10.0kb upstream 10.0kb upstream 15962 true C_Quinoa_Scaffold_1040: 788825-804786 Chenopodium quinoa
AUR62012953 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1040: 794787-804786 Chenopodium quinoa
AUR62012953 10.0kb downstream 10.0kb downstream 15962 true C_Quinoa_Scaffold_1040: 778825-794786 Chenopodium quinoa
AUR62012953 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1040: 778825-788824 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain