Gene : AUR62039780 C. quinoa v1.0
Defline:  (1 of 2) PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Genomic Order:  1
Name:  ? AUR62039780 Secondary Identifier:  ? PAC:36318258
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7511 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62039780 0.5kb upstream 0.5kb upstream 14629 true C_Quinoa_Scaffold_1828: 48696-63324 Chenopodium quinoa
AUR62039780 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1828: 48696-49195 Chenopodium quinoa
AUR62039780 0.5kb downstream 0.5kb downstream 14629 true C_Quinoa_Scaffold_1828: 49196-63824 Chenopodium quinoa
AUR62039780 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1828: 63325-63824 Chenopodium quinoa
AUR62039780 1.0kb upstream 1.0kb upstream 15129 true C_Quinoa_Scaffold_1828: 48196-63324 Chenopodium quinoa
AUR62039780 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1828: 48196-49195 Chenopodium quinoa
AUR62039780 1.0kb downstream 1.0kb downstream 15129 true C_Quinoa_Scaffold_1828: 49196-64324 Chenopodium quinoa
AUR62039780 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1828: 63325-64324 Chenopodium quinoa
AUR62039780 2.0kb upstream 2.0kb upstream 16129 true C_Quinoa_Scaffold_1828: 47196-63324 Chenopodium quinoa
AUR62039780 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1828: 47196-49195 Chenopodium quinoa
AUR62039780 2.0kb downstream 2.0kb downstream 16129 true C_Quinoa_Scaffold_1828: 49196-65324 Chenopodium quinoa
AUR62039780 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1828: 63325-65324 Chenopodium quinoa
AUR62039780 5.0kb upstream 5.0kb upstream 19129 true C_Quinoa_Scaffold_1828: 44196-63324 Chenopodium quinoa
AUR62039780 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1828: 44196-49195 Chenopodium quinoa
AUR62039780 5.0kb downstream 5.0kb downstream 19129 true C_Quinoa_Scaffold_1828: 49196-68324 Chenopodium quinoa
AUR62039780 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1828: 63325-68324 Chenopodium quinoa
AUR62039780 10.0kb upstream 10.0kb upstream 24129 true C_Quinoa_Scaffold_1828: 39196-63324 Chenopodium quinoa
AUR62039780 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1828: 39196-49195 Chenopodium quinoa
AUR62039780 10.0kb downstream 10.0kb downstream 24129 true C_Quinoa_Scaffold_1828: 49196-73324 Chenopodium quinoa
AUR62039780 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1828: 63325-73324 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain