Gene : AUR62022954 C. quinoa v1.0
Defline:  (1 of 2) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  191
Name:  ? AUR62022954 Secondary Identifier:  ? PAC:36295977
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5466 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62022954 0.5kb upstream 0.5kb upstream 3698 true C_Quinoa_Scaffold_3378: 2589931-2593628 Chenopodium quinoa
AUR62022954 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3378: 2593129-2593628 Chenopodium quinoa
AUR62022954 0.5kb downstream 0.5kb downstream 3698 true C_Quinoa_Scaffold_3378: 2589431-2593128 Chenopodium quinoa
AUR62022954 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3378: 2589431-2589930 Chenopodium quinoa
AUR62022954 1.0kb upstream 1.0kb upstream 4198 true C_Quinoa_Scaffold_3378: 2589931-2594128 Chenopodium quinoa
AUR62022954 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3378: 2593129-2594128 Chenopodium quinoa
AUR62022954 1.0kb downstream 1.0kb downstream 4198 true C_Quinoa_Scaffold_3378: 2588931-2593128 Chenopodium quinoa
AUR62022954 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3378: 2588931-2589930 Chenopodium quinoa
AUR62022954 2.0kb upstream 2.0kb upstream 5198 true C_Quinoa_Scaffold_3378: 2589931-2595128 Chenopodium quinoa
AUR62022954 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3378: 2593129-2595128 Chenopodium quinoa
AUR62022954 2.0kb downstream 2.0kb downstream 5198 true C_Quinoa_Scaffold_3378: 2587931-2593128 Chenopodium quinoa
AUR62022954 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3378: 2587931-2589930 Chenopodium quinoa
AUR62022954 5.0kb upstream 5.0kb upstream 8198 true C_Quinoa_Scaffold_3378: 2589931-2598128 Chenopodium quinoa
AUR62022954 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3378: 2593129-2598128 Chenopodium quinoa
AUR62022954 5.0kb downstream 5.0kb downstream 8198 true C_Quinoa_Scaffold_3378: 2584931-2593128 Chenopodium quinoa
AUR62022954 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3378: 2584931-2589930 Chenopodium quinoa
AUR62022954 10.0kb upstream 10.0kb upstream 13198 true C_Quinoa_Scaffold_3378: 2589931-2603128 Chenopodium quinoa
AUR62022954 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3378: 2593129-2603128 Chenopodium quinoa
AUR62022954 10.0kb downstream 10.0kb downstream 13198 true C_Quinoa_Scaffold_3378: 2579931-2593128 Chenopodium quinoa
AUR62022954 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3378: 2579931-2589930 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain