Gene : AUR62018815 C. quinoa v1.0

Defline:  (1 of 4) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Genomic Order:  220
Name:  ? AUR62018815 Secondary Identifier:  ? PAC:36310100

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62018815 0.5kb upstream 0.5kb upstream 2448 true C_Quinoa_Scaffold_1817: 2470522-2472969 Chenopodium quinoa
AUR62018815 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1817: 2472470-2472969 Chenopodium quinoa
AUR62018815 0.5kb downstream 0.5kb downstream 2448 true C_Quinoa_Scaffold_1817: 2470022-2472469 Chenopodium quinoa
AUR62018815 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1817: 2470022-2470521 Chenopodium quinoa
AUR62018815 1.0kb upstream 1.0kb upstream 2948 true C_Quinoa_Scaffold_1817: 2470522-2473469 Chenopodium quinoa
AUR62018815 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1817: 2472470-2473469 Chenopodium quinoa
AUR62018815 1.0kb downstream 1.0kb downstream 2948 true C_Quinoa_Scaffold_1817: 2469522-2472469 Chenopodium quinoa
AUR62018815 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1817: 2469522-2470521 Chenopodium quinoa
AUR62018815 2.0kb upstream 2.0kb upstream 3948 true C_Quinoa_Scaffold_1817: 2470522-2474469 Chenopodium quinoa
AUR62018815 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1817: 2472470-2474469 Chenopodium quinoa
AUR62018815 2.0kb downstream 2.0kb downstream 3948 true C_Quinoa_Scaffold_1817: 2468522-2472469 Chenopodium quinoa
AUR62018815 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1817: 2468522-2470521 Chenopodium quinoa
AUR62018815 5.0kb upstream 5.0kb upstream 6948 true C_Quinoa_Scaffold_1817: 2470522-2477469 Chenopodium quinoa
AUR62018815 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1817: 2472470-2477469 Chenopodium quinoa
AUR62018815 5.0kb downstream 5.0kb downstream 6948 true C_Quinoa_Scaffold_1817: 2465522-2472469 Chenopodium quinoa
AUR62018815 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1817: 2465522-2470521 Chenopodium quinoa
AUR62018815 10.0kb upstream 10.0kb upstream 11948 true C_Quinoa_Scaffold_1817: 2470522-2482469 Chenopodium quinoa
AUR62018815 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1817: 2472470-2482469 Chenopodium quinoa
AUR62018815 10.0kb downstream 10.0kb downstream 11948 true C_Quinoa_Scaffold_1817: 2460522-2472469 Chenopodium quinoa
AUR62018815 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1817: 2460522-2470521 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780059 5273 Angiosperm View MSA
123744936 5271 Pentapetalae View MSA
122771305 5272 Eudicot View MSA
121051692 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain