Gene : AUR62001871 C. quinoa v1.0
Defline:  (1 of 3) PTHR11709:SF68 - LACCASE-13-RELATED Genomic Order:  787
Name:  ? AUR62001871 Secondary Identifier:  ? PAC:36314417
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5466 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62001871 0.5kb upstream 0.5kb upstream 9553 true C_Quinoa_Scaffold_2716: 9500975-9510527 Chenopodium quinoa
AUR62001871 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2716: 9500975-9501474 Chenopodium quinoa
AUR62001871 0.5kb downstream 0.5kb downstream 9553 true C_Quinoa_Scaffold_2716: 9501475-9511027 Chenopodium quinoa
AUR62001871 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2716: 9510528-9511027 Chenopodium quinoa
AUR62001871 1.0kb upstream 1.0kb upstream 10053 true C_Quinoa_Scaffold_2716: 9500475-9510527 Chenopodium quinoa
AUR62001871 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2716: 9500475-9501474 Chenopodium quinoa
AUR62001871 1.0kb downstream 1.0kb downstream 10053 true C_Quinoa_Scaffold_2716: 9501475-9511527 Chenopodium quinoa
AUR62001871 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2716: 9510528-9511527 Chenopodium quinoa
AUR62001871 2.0kb upstream 2.0kb upstream 11053 true C_Quinoa_Scaffold_2716: 9499475-9510527 Chenopodium quinoa
AUR62001871 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2716: 9499475-9501474 Chenopodium quinoa
AUR62001871 2.0kb downstream 2.0kb downstream 11053 true C_Quinoa_Scaffold_2716: 9501475-9512527 Chenopodium quinoa
AUR62001871 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2716: 9510528-9512527 Chenopodium quinoa
AUR62001871 5.0kb upstream 5.0kb upstream 14053 true C_Quinoa_Scaffold_2716: 9496475-9510527 Chenopodium quinoa
AUR62001871 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2716: 9496475-9501474 Chenopodium quinoa
AUR62001871 5.0kb downstream 5.0kb downstream 14053 true C_Quinoa_Scaffold_2716: 9501475-9515527 Chenopodium quinoa
AUR62001871 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2716: 9510528-9515527 Chenopodium quinoa
AUR62001871 10.0kb upstream 10.0kb upstream 19053 true C_Quinoa_Scaffold_2716: 9491475-9510527 Chenopodium quinoa
AUR62001871 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2716: 9491475-9501474 Chenopodium quinoa
AUR62001871 10.0kb downstream 10.0kb downstream 19053 true C_Quinoa_Scaffold_2716: 9501475-9520527 Chenopodium quinoa
AUR62001871 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2716: 9510528-9520527 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752293 5271 Pentapetalae View MSA
122774464 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain