Gene : AUR62020505 C. quinoa v1.0
Defline:  (1 of 2) PTHR10314//PTHR10314:SF98 - SER/THR DEHYDRATASE, TRP SYNTHASE // TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Genomic Order:  243
Name:  ? AUR62020505 Secondary Identifier:  ? PAC:36301056
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRPSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62020505 0.5kb upstream 0.5kb upstream 5228 true C_Quinoa_Scaffold_1373: 3451545-3456772 Chenopodium quinoa
AUR62020505 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1373: 3451545-3452044 Chenopodium quinoa
AUR62020505 0.5kb downstream 0.5kb downstream 5228 true C_Quinoa_Scaffold_1373: 3452045-3457272 Chenopodium quinoa
AUR62020505 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1373: 3456773-3457272 Chenopodium quinoa
AUR62020505 1.0kb upstream 1.0kb upstream 5728 true C_Quinoa_Scaffold_1373: 3451045-3456772 Chenopodium quinoa
AUR62020505 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1373: 3451045-3452044 Chenopodium quinoa
AUR62020505 1.0kb downstream 1.0kb downstream 5728 true C_Quinoa_Scaffold_1373: 3452045-3457772 Chenopodium quinoa
AUR62020505 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1373: 3456773-3457772 Chenopodium quinoa
AUR62020505 2.0kb upstream 2.0kb upstream 6728 true C_Quinoa_Scaffold_1373: 3450045-3456772 Chenopodium quinoa
AUR62020505 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1373: 3450045-3452044 Chenopodium quinoa
AUR62020505 2.0kb downstream 2.0kb downstream 6728 true C_Quinoa_Scaffold_1373: 3452045-3458772 Chenopodium quinoa
AUR62020505 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1373: 3456773-3458772 Chenopodium quinoa
AUR62020505 5.0kb upstream 5.0kb upstream 9728 true C_Quinoa_Scaffold_1373: 3447045-3456772 Chenopodium quinoa
AUR62020505 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1373: 3447045-3452044 Chenopodium quinoa
AUR62020505 5.0kb downstream 5.0kb downstream 9728 true C_Quinoa_Scaffold_1373: 3452045-3461772 Chenopodium quinoa
AUR62020505 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1373: 3456773-3461772 Chenopodium quinoa
AUR62020505 10.0kb upstream 10.0kb upstream 14728 true C_Quinoa_Scaffold_1373: 3442045-3456772 Chenopodium quinoa
AUR62020505 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1373: 3442045-3452044 Chenopodium quinoa
AUR62020505 10.0kb downstream 10.0kb downstream 14728 true C_Quinoa_Scaffold_1373: 3452045-3466772 Chenopodium quinoa
AUR62020505 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1373: 3456773-3466772 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain