Gene : AUR62031623 C. quinoa v1.0

Defline:  (1 of 2) K02434 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B (gatB, PET112) Genomic Order:  17
Name:  ? AUR62031623 Secondary Identifier:  ? PAC:36324893

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5921 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62031623 0.5kb upstream 0.5kb upstream 16793 true C_Quinoa_Scaffold_1695: 400501-417293 Chenopodium quinoa
AUR62031623 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1695: 416794-417293 Chenopodium quinoa
AUR62031623 0.5kb downstream 0.5kb downstream 16793 true C_Quinoa_Scaffold_1695: 400001-416793 Chenopodium quinoa
AUR62031623 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1695: 400001-400500 Chenopodium quinoa
AUR62031623 1.0kb upstream 1.0kb upstream 17293 true C_Quinoa_Scaffold_1695: 400501-417793 Chenopodium quinoa
AUR62031623 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1695: 416794-417793 Chenopodium quinoa
AUR62031623 1.0kb downstream 1.0kb downstream 17293 true C_Quinoa_Scaffold_1695: 399501-416793 Chenopodium quinoa
AUR62031623 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1695: 399501-400500 Chenopodium quinoa
AUR62031623 2.0kb upstream 2.0kb upstream 18293 true C_Quinoa_Scaffold_1695: 400501-418793 Chenopodium quinoa
AUR62031623 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1695: 416794-418793 Chenopodium quinoa
AUR62031623 2.0kb downstream 2.0kb downstream 18293 true C_Quinoa_Scaffold_1695: 398501-416793 Chenopodium quinoa
AUR62031623 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1695: 398501-400500 Chenopodium quinoa
AUR62031623 5.0kb upstream 5.0kb upstream 21293 true C_Quinoa_Scaffold_1695: 400501-421793 Chenopodium quinoa
AUR62031623 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1695: 416794-421793 Chenopodium quinoa
AUR62031623 5.0kb downstream 5.0kb downstream 21293 true C_Quinoa_Scaffold_1695: 395501-416793 Chenopodium quinoa
AUR62031623 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1695: 395501-400500 Chenopodium quinoa
AUR62031623 10.0kb upstream 10.0kb upstream 26293 true C_Quinoa_Scaffold_1695: 400501-426793 Chenopodium quinoa
AUR62031623 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1695: 416794-426793 Chenopodium quinoa
AUR62031623 10.0kb downstream 10.0kb downstream 26293 true C_Quinoa_Scaffold_1695: 390501-416793 Chenopodium quinoa
AUR62031623 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1695: 390501-400500 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain