Gene : AUR62027292 C. quinoa v1.0

Defline:  (1 of 2) PTHR12121//PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  138
Name:  ? AUR62027292 Secondary Identifier:  ? PAC:36283412

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62027292 0.5kb upstream 0.5kb upstream 7402 true C_Quinoa_Scaffold_2924: 1704756-1712157 Chenopodium quinoa
AUR62027292 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2924: 1711658-1712157 Chenopodium quinoa
AUR62027292 0.5kb downstream 0.5kb downstream 7402 true C_Quinoa_Scaffold_2924: 1704256-1711657 Chenopodium quinoa
AUR62027292 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2924: 1704256-1704755 Chenopodium quinoa
AUR62027292 1.0kb upstream 1.0kb upstream 7902 true C_Quinoa_Scaffold_2924: 1704756-1712657 Chenopodium quinoa
AUR62027292 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2924: 1711658-1712657 Chenopodium quinoa
AUR62027292 1.0kb downstream 1.0kb downstream 7902 true C_Quinoa_Scaffold_2924: 1703756-1711657 Chenopodium quinoa
AUR62027292 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2924: 1703756-1704755 Chenopodium quinoa
AUR62027292 2.0kb upstream 2.0kb upstream 8902 true C_Quinoa_Scaffold_2924: 1704756-1713657 Chenopodium quinoa
AUR62027292 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2924: 1711658-1713657 Chenopodium quinoa
AUR62027292 2.0kb downstream 2.0kb downstream 8902 true C_Quinoa_Scaffold_2924: 1702756-1711657 Chenopodium quinoa
AUR62027292 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2924: 1702756-1704755 Chenopodium quinoa
AUR62027292 5.0kb upstream 5.0kb upstream 11902 true C_Quinoa_Scaffold_2924: 1704756-1716657 Chenopodium quinoa
AUR62027292 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2924: 1711658-1716657 Chenopodium quinoa
AUR62027292 5.0kb downstream 5.0kb downstream 11902 true C_Quinoa_Scaffold_2924: 1699756-1711657 Chenopodium quinoa
AUR62027292 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2924: 1699756-1704755 Chenopodium quinoa
AUR62027292 10.0kb upstream 10.0kb upstream 16902 true C_Quinoa_Scaffold_2924: 1704756-1721657 Chenopodium quinoa
AUR62027292 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2924: 1711658-1721657 Chenopodium quinoa
AUR62027292 10.0kb downstream 10.0kb downstream 16902 true C_Quinoa_Scaffold_2924: 1694756-1711657 Chenopodium quinoa
AUR62027292 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2924: 1694756-1704755 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain