Gene : AUR62019827 C. quinoa v1.0
Defline:  (1 of 3) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  101
Name:  ? AUR62019827 Secondary Identifier:  ? PAC:36310585
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62019827 0.5kb upstream 0.5kb upstream 6132 true C_Quinoa_Scaffold_1480: 1427687-1433818 Chenopodium quinoa
AUR62019827 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1480: 1433319-1433818 Chenopodium quinoa
AUR62019827 0.5kb downstream 0.5kb downstream 6132 true C_Quinoa_Scaffold_1480: 1427187-1433318 Chenopodium quinoa
AUR62019827 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1480: 1427187-1427686 Chenopodium quinoa
AUR62019827 1.0kb upstream 1.0kb upstream 6632 true C_Quinoa_Scaffold_1480: 1427687-1434318 Chenopodium quinoa
AUR62019827 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1480: 1433319-1434318 Chenopodium quinoa
AUR62019827 1.0kb downstream 1.0kb downstream 6632 true C_Quinoa_Scaffold_1480: 1426687-1433318 Chenopodium quinoa
AUR62019827 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1480: 1426687-1427686 Chenopodium quinoa
AUR62019827 2.0kb upstream 2.0kb upstream 7632 true C_Quinoa_Scaffold_1480: 1427687-1435318 Chenopodium quinoa
AUR62019827 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1480: 1433319-1435318 Chenopodium quinoa
AUR62019827 2.0kb downstream 2.0kb downstream 7632 true C_Quinoa_Scaffold_1480: 1425687-1433318 Chenopodium quinoa
AUR62019827 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1480: 1425687-1427686 Chenopodium quinoa
AUR62019827 5.0kb upstream 5.0kb upstream 10632 true C_Quinoa_Scaffold_1480: 1427687-1438318 Chenopodium quinoa
AUR62019827 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1480: 1433319-1438318 Chenopodium quinoa
AUR62019827 5.0kb downstream 5.0kb downstream 10632 true C_Quinoa_Scaffold_1480: 1422687-1433318 Chenopodium quinoa
AUR62019827 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1480: 1422687-1427686 Chenopodium quinoa
AUR62019827 10.0kb upstream 10.0kb upstream 15632 true C_Quinoa_Scaffold_1480: 1427687-1443318 Chenopodium quinoa
AUR62019827 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1480: 1433319-1443318 Chenopodium quinoa
AUR62019827 10.0kb downstream 10.0kb downstream 15632 true C_Quinoa_Scaffold_1480: 1417687-1433318 Chenopodium quinoa
AUR62019827 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1480: 1417687-1427686 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123750748 5271 Pentapetalae View MSA
122786730 5272 Eudicot View MSA
122043550 5273 Angiosperm View MSA
121310146 5274 Embryophyte View MSA
123347715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain