Gene : AUR62038785 C. quinoa v1.0

Defline:  (1 of 3) K11097 - small nuclear ribonucleoprotein E (SNRPE, SME) Genomic Order:  13
Name:  ? AUR62038785 Secondary Identifier:  ? PAC:36304132

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038785 0.5kb upstream 0.5kb upstream 3760 true C_Quinoa_Scaffold_1559: 2190659-2194418 Chenopodium quinoa
AUR62038785 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1559: 2193919-2194418 Chenopodium quinoa
AUR62038785 0.5kb downstream 0.5kb downstream 3760 true C_Quinoa_Scaffold_1559: 2190159-2193918 Chenopodium quinoa
AUR62038785 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1559: 2190159-2190658 Chenopodium quinoa
AUR62038785 1.0kb upstream 1.0kb upstream 4260 true C_Quinoa_Scaffold_1559: 2190659-2194918 Chenopodium quinoa
AUR62038785 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1559: 2193919-2194918 Chenopodium quinoa
AUR62038785 1.0kb downstream 1.0kb downstream 4260 true C_Quinoa_Scaffold_1559: 2189659-2193918 Chenopodium quinoa
AUR62038785 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1559: 2189659-2190658 Chenopodium quinoa
AUR62038785 2.0kb upstream 2.0kb upstream 5260 true C_Quinoa_Scaffold_1559: 2190659-2195918 Chenopodium quinoa
AUR62038785 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1559: 2193919-2195918 Chenopodium quinoa
AUR62038785 2.0kb downstream 2.0kb downstream 5260 true C_Quinoa_Scaffold_1559: 2188659-2193918 Chenopodium quinoa
AUR62038785 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1559: 2188659-2190658 Chenopodium quinoa
AUR62038785 5.0kb upstream 5.0kb upstream 8260 true C_Quinoa_Scaffold_1559: 2190659-2198918 Chenopodium quinoa
AUR62038785 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1559: 2193919-2198918 Chenopodium quinoa
AUR62038785 5.0kb downstream 5.0kb downstream 8260 true C_Quinoa_Scaffold_1559: 2185659-2193918 Chenopodium quinoa
AUR62038785 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1559: 2185659-2190658 Chenopodium quinoa
AUR62038785 10.0kb upstream 10.0kb upstream 13260 true C_Quinoa_Scaffold_1559: 2190659-2203918 Chenopodium quinoa
AUR62038785 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1559: 2193919-2203918 Chenopodium quinoa
AUR62038785 10.0kb downstream 10.0kb downstream 13260 true C_Quinoa_Scaffold_1559: 2180659-2193918 Chenopodium quinoa
AUR62038785 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1559: 2180659-2190658 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123753789 5271 Pentapetalae View MSA
122788242 5272 Eudicot View MSA
122042193 5273 Angiosperm View MSA
121347325 5274 Embryophyte View MSA
123424375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain