Gene : AUR62029008 C. quinoa v1.0
Defline:  (1 of 2) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 Genomic Order:  81
Name:  ? AUR62029008 Secondary Identifier:  ? PAC:36283223
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7511 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62029008 0.5kb upstream 0.5kb upstream 1070 true C_Quinoa_Scaffold_2412: 1772480-1773549 Chenopodium quinoa
AUR62029008 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2412: 1773050-1773549 Chenopodium quinoa
AUR62029008 0.5kb downstream 0.5kb downstream 1070 true C_Quinoa_Scaffold_2412: 1771980-1773049 Chenopodium quinoa
AUR62029008 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2412: 1771980-1772479 Chenopodium quinoa
AUR62029008 1.0kb upstream 1.0kb upstream 1570 true C_Quinoa_Scaffold_2412: 1772480-1774049 Chenopodium quinoa
AUR62029008 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2412: 1773050-1774049 Chenopodium quinoa
AUR62029008 1.0kb downstream 1.0kb downstream 1570 true C_Quinoa_Scaffold_2412: 1771480-1773049 Chenopodium quinoa
AUR62029008 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2412: 1771480-1772479 Chenopodium quinoa
AUR62029008 2.0kb upstream 2.0kb upstream 2570 true C_Quinoa_Scaffold_2412: 1772480-1775049 Chenopodium quinoa
AUR62029008 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2412: 1773050-1775049 Chenopodium quinoa
AUR62029008 2.0kb downstream 2.0kb downstream 2570 true C_Quinoa_Scaffold_2412: 1770480-1773049 Chenopodium quinoa
AUR62029008 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2412: 1770480-1772479 Chenopodium quinoa
AUR62029008 5.0kb upstream 5.0kb upstream 5570 true C_Quinoa_Scaffold_2412: 1772480-1778049 Chenopodium quinoa
AUR62029008 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2412: 1773050-1778049 Chenopodium quinoa
AUR62029008 5.0kb downstream 5.0kb downstream 5570 true C_Quinoa_Scaffold_2412: 1767480-1773049 Chenopodium quinoa
AUR62029008 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2412: 1767480-1772479 Chenopodium quinoa
AUR62029008 10.0kb upstream 10.0kb upstream 10570 true C_Quinoa_Scaffold_2412: 1772480-1783049 Chenopodium quinoa
AUR62029008 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2412: 1773050-1783049 Chenopodium quinoa
AUR62029008 10.0kb downstream 10.0kb downstream 10570 true C_Quinoa_Scaffold_2412: 1762480-1773049 Chenopodium quinoa
AUR62029008 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2412: 1762480-1772479 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123746607 5271 Pentapetalae View MSA
122791525 5272 Eudicot View MSA
122041904 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121309901 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain