Gene : AUR62030219 C. quinoa v1.0
Defline:  (1 of 1) PF00153//PF01128 - Mitochondrial carrier protein (Mito_carr) // 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (IspD) Genomic Order:  111
Name:  ? AUR62030219 Secondary Identifier:  ? PAC:36304891
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7560 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62030219 0.5kb upstream 0.5kb upstream 12986 true C_Quinoa_Scaffold_1747: 6622296-6635281 Chenopodium quinoa
AUR62030219 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1747: 6634782-6635281 Chenopodium quinoa
AUR62030219 0.5kb downstream 0.5kb downstream 12986 true C_Quinoa_Scaffold_1747: 6621796-6634781 Chenopodium quinoa
AUR62030219 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1747: 6621796-6622295 Chenopodium quinoa
AUR62030219 1.0kb upstream 1.0kb upstream 13486 true C_Quinoa_Scaffold_1747: 6622296-6635781 Chenopodium quinoa
AUR62030219 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1747: 6634782-6635781 Chenopodium quinoa
AUR62030219 1.0kb downstream 1.0kb downstream 13486 true C_Quinoa_Scaffold_1747: 6621296-6634781 Chenopodium quinoa
AUR62030219 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1747: 6621296-6622295 Chenopodium quinoa
AUR62030219 2.0kb upstream 2.0kb upstream 14486 true C_Quinoa_Scaffold_1747: 6622296-6636781 Chenopodium quinoa
AUR62030219 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1747: 6634782-6636781 Chenopodium quinoa
AUR62030219 2.0kb downstream 2.0kb downstream 14486 true C_Quinoa_Scaffold_1747: 6620296-6634781 Chenopodium quinoa
AUR62030219 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1747: 6620296-6622295 Chenopodium quinoa
AUR62030219 5.0kb upstream 5.0kb upstream 17486 true C_Quinoa_Scaffold_1747: 6622296-6639781 Chenopodium quinoa
AUR62030219 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1747: 6634782-6639781 Chenopodium quinoa
AUR62030219 5.0kb downstream 5.0kb downstream 17486 true C_Quinoa_Scaffold_1747: 6617296-6634781 Chenopodium quinoa
AUR62030219 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1747: 6617296-6622295 Chenopodium quinoa
AUR62030219 10.0kb upstream 10.0kb upstream 22486 true C_Quinoa_Scaffold_1747: 6622296-6644781 Chenopodium quinoa
AUR62030219 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1747: 6634782-6644781 Chenopodium quinoa
AUR62030219 10.0kb downstream 10.0kb downstream 22486 true C_Quinoa_Scaffold_1747: 6612296-6634781 Chenopodium quinoa
AUR62030219 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1747: 6612296-6622295 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739794 5271 Pentapetalae View MSA
122786593 5272 Eudicot View MSA
122044265 5273 Angiosperm View MSA
121344499 5274 Embryophyte View MSA
123424809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain