Gene : AUR62024084 C. quinoa v1.0
Defline:  (1 of 3) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  213
Name:  ? AUR62024084 Secondary Identifier:  ? PAC:36289766
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PHOTOALL-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-101 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62024084 0.5kb upstream 0.5kb upstream 2929 true C_Quinoa_Scaffold_3389: 6830164-6833092 Chenopodium quinoa
AUR62024084 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3389: 6830164-6830663 Chenopodium quinoa
AUR62024084 0.5kb downstream 0.5kb downstream 2929 true C_Quinoa_Scaffold_3389: 6830664-6833592 Chenopodium quinoa
AUR62024084 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3389: 6833093-6833592 Chenopodium quinoa
AUR62024084 1.0kb upstream 1.0kb upstream 3429 true C_Quinoa_Scaffold_3389: 6829664-6833092 Chenopodium quinoa
AUR62024084 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3389: 6829664-6830663 Chenopodium quinoa
AUR62024084 1.0kb downstream 1.0kb downstream 3429 true C_Quinoa_Scaffold_3389: 6830664-6834092 Chenopodium quinoa
AUR62024084 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3389: 6833093-6834092 Chenopodium quinoa
AUR62024084 2.0kb upstream 2.0kb upstream 4429 true C_Quinoa_Scaffold_3389: 6828664-6833092 Chenopodium quinoa
AUR62024084 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3389: 6828664-6830663 Chenopodium quinoa
AUR62024084 2.0kb downstream 2.0kb downstream 4429 true C_Quinoa_Scaffold_3389: 6830664-6835092 Chenopodium quinoa
AUR62024084 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3389: 6833093-6835092 Chenopodium quinoa
AUR62024084 5.0kb upstream 5.0kb upstream 7429 true C_Quinoa_Scaffold_3389: 6825664-6833092 Chenopodium quinoa
AUR62024084 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3389: 6825664-6830663 Chenopodium quinoa
AUR62024084 5.0kb downstream 5.0kb downstream 7429 true C_Quinoa_Scaffold_3389: 6830664-6838092 Chenopodium quinoa
AUR62024084 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3389: 6833093-6838092 Chenopodium quinoa
AUR62024084 10.0kb upstream 10.0kb upstream 12429 true C_Quinoa_Scaffold_3389: 6820664-6833092 Chenopodium quinoa
AUR62024084 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3389: 6820664-6830663 Chenopodium quinoa
AUR62024084 10.0kb downstream 10.0kb downstream 12429 true C_Quinoa_Scaffold_3389: 6830664-6843092 Chenopodium quinoa
AUR62024084 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3389: 6833093-6843092 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain