Gene : AUR62022550 C. quinoa v1.0

Defline:  (1 of 2) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  11
Name:  ? AUR62022550 Secondary Identifier:  ? PAC:36312182

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62022550 0.5kb upstream 0.5kb upstream 3034 true C_Quinoa_Scaffold_1870: 113729-116762 Chenopodium quinoa
AUR62022550 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1870: 113729-114228 Chenopodium quinoa
AUR62022550 0.5kb downstream 0.5kb downstream 3034 true C_Quinoa_Scaffold_1870: 114229-117262 Chenopodium quinoa
AUR62022550 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1870: 116763-117262 Chenopodium quinoa
AUR62022550 1.0kb upstream 1.0kb upstream 3534 true C_Quinoa_Scaffold_1870: 113229-116762 Chenopodium quinoa
AUR62022550 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1870: 113229-114228 Chenopodium quinoa
AUR62022550 1.0kb downstream 1.0kb downstream 3534 true C_Quinoa_Scaffold_1870: 114229-117762 Chenopodium quinoa
AUR62022550 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1870: 116763-117762 Chenopodium quinoa
AUR62022550 2.0kb upstream 2.0kb upstream 4534 true C_Quinoa_Scaffold_1870: 112229-116762 Chenopodium quinoa
AUR62022550 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1870: 112229-114228 Chenopodium quinoa
AUR62022550 2.0kb downstream 2.0kb downstream 4534 true C_Quinoa_Scaffold_1870: 114229-118762 Chenopodium quinoa
AUR62022550 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1870: 116763-118762 Chenopodium quinoa
AUR62022550 5.0kb upstream 5.0kb upstream 7534 true C_Quinoa_Scaffold_1870: 109229-116762 Chenopodium quinoa
AUR62022550 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1870: 109229-114228 Chenopodium quinoa
AUR62022550 5.0kb downstream 5.0kb downstream 7534 true C_Quinoa_Scaffold_1870: 114229-121762 Chenopodium quinoa
AUR62022550 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1870: 116763-121762 Chenopodium quinoa
AUR62022550 10.0kb upstream 10.0kb upstream 12534 true C_Quinoa_Scaffold_1870: 104229-116762 Chenopodium quinoa
AUR62022550 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1870: 104229-114228 Chenopodium quinoa
AUR62022550 10.0kb downstream 10.0kb downstream 12534 true C_Quinoa_Scaffold_1870: 114229-126762 Chenopodium quinoa
AUR62022550 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1870: 116763-126762 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain