Gene : AUR62044558 C. quinoa v1.0
Defline:  (1 of 21) 1.10.3.9 - Photosystem II Genomic Order:  2
Name:  ? AUR62044558 Secondary Identifier:  ? PAC:36290472
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PHOTOALL-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-101 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62044558 0.5kb upstream 0.5kb upstream 818 true C_Quinoa_Scaffold_2093: 122626-123443 Chenopodium quinoa
AUR62044558 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2093: 122944-123443 Chenopodium quinoa
AUR62044558 0.5kb downstream 0.5kb downstream 818 true C_Quinoa_Scaffold_2093: 122126-122943 Chenopodium quinoa
AUR62044558 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2093: 122126-122625 Chenopodium quinoa
AUR62044558 1.0kb upstream 1.0kb upstream 1318 true C_Quinoa_Scaffold_2093: 122626-123943 Chenopodium quinoa
AUR62044558 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2093: 122944-123943 Chenopodium quinoa
AUR62044558 1.0kb downstream 1.0kb downstream 1318 true C_Quinoa_Scaffold_2093: 121626-122943 Chenopodium quinoa
AUR62044558 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2093: 121626-122625 Chenopodium quinoa
AUR62044558 2.0kb upstream 2.0kb upstream 2318 true C_Quinoa_Scaffold_2093: 122626-124943 Chenopodium quinoa
AUR62044558 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2093: 122944-124943 Chenopodium quinoa
AUR62044558 2.0kb downstream 2.0kb downstream 2318 true C_Quinoa_Scaffold_2093: 120626-122943 Chenopodium quinoa
AUR62044558 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2093: 120626-122625 Chenopodium quinoa
AUR62044558 5.0kb upstream 5.0kb upstream 5318 true C_Quinoa_Scaffold_2093: 122626-127943 Chenopodium quinoa
AUR62044558 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2093: 122944-127943 Chenopodium quinoa
AUR62044558 5.0kb downstream 5.0kb downstream 5318 true C_Quinoa_Scaffold_2093: 117626-122943 Chenopodium quinoa
AUR62044558 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2093: 117626-122625 Chenopodium quinoa
AUR62044558 10.0kb upstream 10.0kb upstream 10318 true C_Quinoa_Scaffold_2093: 122626-132943 Chenopodium quinoa
AUR62044558 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2093: 122944-132943 Chenopodium quinoa
AUR62044558 10.0kb downstream 10.0kb downstream 10318 true C_Quinoa_Scaffold_2093: 112626-122943 Chenopodium quinoa
AUR62044558 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2093: 112626-122625 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain