Gene : AUR62015110 C. quinoa v1.0
Defline:  (1 of 2) 2.4.1.182 - Lipid-A-disaccharide synthase Genomic Order:  187
Name:  ? AUR62015110 Secondary Identifier:  ? PAC:36318806
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa NAGLIPASYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62015110 0.5kb upstream 0.5kb upstream 5175 true C_Quinoa_Scaffold_2888: 3814122-3819296 Chenopodium quinoa
AUR62015110 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2888: 3818797-3819296 Chenopodium quinoa
AUR62015110 0.5kb downstream 0.5kb downstream 5175 true C_Quinoa_Scaffold_2888: 3813622-3818796 Chenopodium quinoa
AUR62015110 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2888: 3813622-3814121 Chenopodium quinoa
AUR62015110 1.0kb upstream 1.0kb upstream 5675 true C_Quinoa_Scaffold_2888: 3814122-3819796 Chenopodium quinoa
AUR62015110 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2888: 3818797-3819796 Chenopodium quinoa
AUR62015110 1.0kb downstream 1.0kb downstream 5675 true C_Quinoa_Scaffold_2888: 3813122-3818796 Chenopodium quinoa
AUR62015110 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2888: 3813122-3814121 Chenopodium quinoa
AUR62015110 2.0kb upstream 2.0kb upstream 6675 true C_Quinoa_Scaffold_2888: 3814122-3820796 Chenopodium quinoa
AUR62015110 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2888: 3818797-3820796 Chenopodium quinoa
AUR62015110 2.0kb downstream 2.0kb downstream 6675 true C_Quinoa_Scaffold_2888: 3812122-3818796 Chenopodium quinoa
AUR62015110 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2888: 3812122-3814121 Chenopodium quinoa
AUR62015110 5.0kb upstream 5.0kb upstream 9675 true C_Quinoa_Scaffold_2888: 3814122-3823796 Chenopodium quinoa
AUR62015110 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2888: 3818797-3823796 Chenopodium quinoa
AUR62015110 5.0kb downstream 5.0kb downstream 9675 true C_Quinoa_Scaffold_2888: 3809122-3818796 Chenopodium quinoa
AUR62015110 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2888: 3809122-3814121 Chenopodium quinoa
AUR62015110 10.0kb upstream 10.0kb upstream 14675 true C_Quinoa_Scaffold_2888: 3814122-3828796 Chenopodium quinoa
AUR62015110 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2888: 3818797-3828796 Chenopodium quinoa
AUR62015110 10.0kb downstream 10.0kb downstream 14675 true C_Quinoa_Scaffold_2888: 3804122-3818796 Chenopodium quinoa
AUR62015110 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2888: 3804122-3814121 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain