Gene : Phvul.001G036200 P. vulgaris v2.1
Defline:  (1 of 3) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  365
Name:  ? Phvul.001G036200 Secondary Identifier:  ? PAC:37170693
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G036200 0.5kb upstream 0.5kb upstream 3911 true Chr01: 3377343-3381253 Phaseolus vulgaris
Phvul.001G036200 0.5kb upstream 0.5kb upstream 500 false Chr01: 3380754-3381253 Phaseolus vulgaris
Phvul.001G036200 0.5kb downstream 0.5kb downstream 3911 true Chr01: 3376843-3380753 Phaseolus vulgaris
Phvul.001G036200 0.5kb downstream 0.5kb downstream 500 false Chr01: 3376843-3377342 Phaseolus vulgaris
Phvul.001G036200 1.0kb upstream 1.0kb upstream 4411 true Chr01: 3377343-3381753 Phaseolus vulgaris
Phvul.001G036200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3380754-3381753 Phaseolus vulgaris
Phvul.001G036200 1.0kb downstream 1.0kb downstream 4411 true Chr01: 3376343-3380753 Phaseolus vulgaris
Phvul.001G036200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3376343-3377342 Phaseolus vulgaris
Phvul.001G036200 2.0kb upstream 2.0kb upstream 5411 true Chr01: 3377343-3382753 Phaseolus vulgaris
Phvul.001G036200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3380754-3382753 Phaseolus vulgaris
Phvul.001G036200 2.0kb downstream 2.0kb downstream 5411 true Chr01: 3375343-3380753 Phaseolus vulgaris
Phvul.001G036200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3375343-3377342 Phaseolus vulgaris
Phvul.001G036200 5.0kb upstream 5.0kb upstream 8411 true Chr01: 3377343-3385753 Phaseolus vulgaris
Phvul.001G036200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3380754-3385753 Phaseolus vulgaris
Phvul.001G036200 5.0kb downstream 5.0kb downstream 8411 true Chr01: 3372343-3380753 Phaseolus vulgaris
Phvul.001G036200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3372343-3377342 Phaseolus vulgaris
Phvul.001G036200 10.0kb upstream 10.0kb upstream 13411 true Chr01: 3377343-3390753 Phaseolus vulgaris
Phvul.001G036200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3380754-3390753 Phaseolus vulgaris
Phvul.001G036200 10.0kb downstream 10.0kb downstream 13411 true Chr01: 3367343-3380753 Phaseolus vulgaris
Phvul.001G036200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3367343-3377342 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122311005 5265 Fabidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.539 0.0 32.5773    
cufflinks 72.0245 0.0 202.703 High  
cufflinks 253.402 0.0 877.875 High High
cufflinks 46.9299 0.0 126.62 High  
cufflinks 51.4311 0.0 140.254 High  
cufflinks 154.438 0.0 484.178 High High
cufflinks 19.4612 0.0 50.3186    
cufflinks 20.4324 0.0 52.8525    
cufflinks 27.2035 0.0 70.7735    
cufflinks 2.04248 0.0 6.21309   Low
cufflinks 75.9043 0.0 214.976 High  

0 Strain