Gene : Phvul.001G036400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF73 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED Genomic Order:  367
Name:  ? Phvul.001G036400 Secondary Identifier:  ? PAC:37168227
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G036400 0.5kb upstream 0.5kb upstream 12658 true Chr01: 3397546-3410203 Phaseolus vulgaris
Phvul.001G036400 0.5kb upstream 0.5kb upstream 500 false Chr01: 3409704-3410203 Phaseolus vulgaris
Phvul.001G036400 0.5kb downstream 0.5kb downstream 12658 true Chr01: 3397046-3409703 Phaseolus vulgaris
Phvul.001G036400 0.5kb downstream 0.5kb downstream 500 false Chr01: 3397046-3397545 Phaseolus vulgaris
Phvul.001G036400 1.0kb upstream 1.0kb upstream 13158 true Chr01: 3397546-3410703 Phaseolus vulgaris
Phvul.001G036400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3409704-3410703 Phaseolus vulgaris
Phvul.001G036400 1.0kb downstream 1.0kb downstream 13158 true Chr01: 3396546-3409703 Phaseolus vulgaris
Phvul.001G036400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3396546-3397545 Phaseolus vulgaris
Phvul.001G036400 2.0kb upstream 2.0kb upstream 14158 true Chr01: 3397546-3411703 Phaseolus vulgaris
Phvul.001G036400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3409704-3411703 Phaseolus vulgaris
Phvul.001G036400 2.0kb downstream 2.0kb downstream 14158 true Chr01: 3395546-3409703 Phaseolus vulgaris
Phvul.001G036400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3395546-3397545 Phaseolus vulgaris
Phvul.001G036400 5.0kb upstream 5.0kb upstream 17158 true Chr01: 3397546-3414703 Phaseolus vulgaris
Phvul.001G036400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3409704-3414703 Phaseolus vulgaris
Phvul.001G036400 5.0kb downstream 5.0kb downstream 17158 true Chr01: 3392546-3409703 Phaseolus vulgaris
Phvul.001G036400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3392546-3397545 Phaseolus vulgaris
Phvul.001G036400 10.0kb upstream 10.0kb upstream 22158 true Chr01: 3397546-3419703 Phaseolus vulgaris
Phvul.001G036400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3409704-3419703 Phaseolus vulgaris
Phvul.001G036400 10.0kb downstream 10.0kb downstream 22158 true Chr01: 3387546-3409703 Phaseolus vulgaris
Phvul.001G036400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3387546-3397545 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306895 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6154 0.0 50.8512    
cufflinks 21.048 0.0 54.6752    
cufflinks 24.8771 0.0 65.0381   High
cufflinks 16.542 0.0 42.7598   Low
cufflinks 16.5504 0.0 42.7843   Low
cufflinks 20.261 0.0 52.5755    
cufflinks 18.862 0.0 48.8925    
cufflinks 19.5159 0.0 50.6293    
cufflinks 22.8064 0.0 59.4541    
cufflinks 26.5037 0.0 69.4566   High
cufflinks 19.948 0.0 51.7078    

0 Strain