Gene : Phvul.001G041100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  433
Name:  ? Phvul.001G041100 Secondary Identifier:  ? PAC:37170344
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4081 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G041100 0.5kb upstream 0.5kb upstream 6318 true Chr01: 4301162-4307479 Phaseolus vulgaris
Phvul.001G041100 0.5kb upstream 0.5kb upstream 500 false Chr01: 4301162-4301661 Phaseolus vulgaris
Phvul.001G041100 0.5kb downstream 0.5kb downstream 6318 true Chr01: 4301662-4307979 Phaseolus vulgaris
Phvul.001G041100 0.5kb downstream 0.5kb downstream 500 false Chr01: 4307480-4307979 Phaseolus vulgaris
Phvul.001G041100 1.0kb upstream 1.0kb upstream 6818 true Chr01: 4300662-4307479 Phaseolus vulgaris
Phvul.001G041100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4300662-4301661 Phaseolus vulgaris
Phvul.001G041100 1.0kb downstream 1.0kb downstream 6818 true Chr01: 4301662-4308479 Phaseolus vulgaris
Phvul.001G041100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4307480-4308479 Phaseolus vulgaris
Phvul.001G041100 2.0kb upstream 2.0kb upstream 7818 true Chr01: 4299662-4307479 Phaseolus vulgaris
Phvul.001G041100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4299662-4301661 Phaseolus vulgaris
Phvul.001G041100 2.0kb downstream 2.0kb downstream 7818 true Chr01: 4301662-4309479 Phaseolus vulgaris
Phvul.001G041100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4307480-4309479 Phaseolus vulgaris
Phvul.001G041100 5.0kb upstream 5.0kb upstream 10818 true Chr01: 4296662-4307479 Phaseolus vulgaris
Phvul.001G041100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4296662-4301661 Phaseolus vulgaris
Phvul.001G041100 5.0kb downstream 5.0kb downstream 10818 true Chr01: 4301662-4312479 Phaseolus vulgaris
Phvul.001G041100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4307480-4312479 Phaseolus vulgaris
Phvul.001G041100 10.0kb upstream 10.0kb upstream 15818 true Chr01: 4291662-4307479 Phaseolus vulgaris
Phvul.001G041100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4291662-4301661 Phaseolus vulgaris
Phvul.001G041100 10.0kb downstream 10.0kb downstream 15818 true Chr01: 4301662-4317479 Phaseolus vulgaris
Phvul.001G041100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4307480-4317479 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306864 5265 Fabidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.661 0.0 186.267 High High
cufflinks 15.5866 0.0 42.9035    
cufflinks 104.675 0.0 277.933 High High
cufflinks 42.5041 0.0 110.157 High  
cufflinks 13.4841 0.0 37.8289    
cufflinks 39.0171 0.0 101.186 High  
cufflinks 6.64609 0.0 19.9669   Low
cufflinks 5.0689 0.0 15.6096   Low
cufflinks 9.08296 0.0 26.4273    
cufflinks 33.7333 0.0 87.9618    
cufflinks 16.2533 0.0 44.7974    

0 Strain