Gene : Phvul.001G041600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10766:SF46 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  428
Name:  ? Phvul.001G041600 Secondary Identifier:  ? PAC:37169223
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G041600 0.5kb upstream 0.5kb upstream 5305 true Chr01: 4264078-4269382 Phaseolus vulgaris
Phvul.001G041600 0.5kb upstream 0.5kb upstream 500 false Chr01: 4264078-4264577 Phaseolus vulgaris
Phvul.001G041600 0.5kb downstream 0.5kb downstream 5305 true Chr01: 4264578-4269882 Phaseolus vulgaris
Phvul.001G041600 0.5kb downstream 0.5kb downstream 500 false Chr01: 4269383-4269882 Phaseolus vulgaris
Phvul.001G041600 1.0kb upstream 1.0kb upstream 5805 true Chr01: 4263578-4269382 Phaseolus vulgaris
Phvul.001G041600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4263578-4264577 Phaseolus vulgaris
Phvul.001G041600 1.0kb downstream 1.0kb downstream 5805 true Chr01: 4264578-4270382 Phaseolus vulgaris
Phvul.001G041600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4269383-4270382 Phaseolus vulgaris
Phvul.001G041600 2.0kb upstream 2.0kb upstream 6805 true Chr01: 4262578-4269382 Phaseolus vulgaris
Phvul.001G041600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4262578-4264577 Phaseolus vulgaris
Phvul.001G041600 2.0kb downstream 2.0kb downstream 6805 true Chr01: 4264578-4271382 Phaseolus vulgaris
Phvul.001G041600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4269383-4271382 Phaseolus vulgaris
Phvul.001G041600 5.0kb upstream 5.0kb upstream 9805 true Chr01: 4259578-4269382 Phaseolus vulgaris
Phvul.001G041600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4259578-4264577 Phaseolus vulgaris
Phvul.001G041600 5.0kb downstream 5.0kb downstream 9805 true Chr01: 4264578-4274382 Phaseolus vulgaris
Phvul.001G041600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4269383-4274382 Phaseolus vulgaris
Phvul.001G041600 10.0kb upstream 10.0kb upstream 14805 true Chr01: 4254578-4269382 Phaseolus vulgaris
Phvul.001G041600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4254578-4264577 Phaseolus vulgaris
Phvul.001G041600 10.0kb downstream 10.0kb downstream 14805 true Chr01: 4264578-4279382 Phaseolus vulgaris
Phvul.001G041600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4269383-4279382 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313457 5265 Fabidae View MSA
124067102 5270 Rosid View MSA
123742579 5271 Pentapetalae View MSA
122788087 5272 Eudicot View MSA
122049863 5273 Angiosperm View MSA
121348852 5274 Embryophyte View MSA
123425843 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2014 0.0 34.4882   Low
cufflinks 42.6133 0.0 112.432 High  
cufflinks 43.4736 0.0 115.1 High  
cufflinks 55.7219 0.0 149.324 High  
cufflinks 58.6799 0.0 158.085 High  
cufflinks 69.8314 0.0 191.919 High  
cufflinks 42.6214 0.0 112.345 High  
cufflinks 39.9012 0.0 105.056 High  
cufflinks 64.3531 0.0 174.682 High  
cufflinks 16.1373 0.0 41.8714   Low
cufflinks 70.2978 0.0 192.536 High  

0 Strain