Gene : Phvul.001G023100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10044:SF118 - F2G19.2 Genomic Order:  234
Name:  ? Phvul.001G023100 Secondary Identifier:  ? PAC:37170145
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G023100 0.5kb upstream 0.5kb upstream 3285 true Chr01: 1926639-1929923 Phaseolus vulgaris
Phvul.001G023100 0.5kb upstream 0.5kb upstream 500 false Chr01: 1929424-1929923 Phaseolus vulgaris
Phvul.001G023100 0.5kb downstream 0.5kb downstream 3285 true Chr01: 1926139-1929423 Phaseolus vulgaris
Phvul.001G023100 0.5kb downstream 0.5kb downstream 500 false Chr01: 1926139-1926638 Phaseolus vulgaris
Phvul.001G023100 1.0kb upstream 1.0kb upstream 3785 true Chr01: 1926639-1930423 Phaseolus vulgaris
Phvul.001G023100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1929424-1930423 Phaseolus vulgaris
Phvul.001G023100 1.0kb downstream 1.0kb downstream 3785 true Chr01: 1925639-1929423 Phaseolus vulgaris
Phvul.001G023100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1925639-1926638 Phaseolus vulgaris
Phvul.001G023100 2.0kb upstream 2.0kb upstream 4785 true Chr01: 1926639-1931423 Phaseolus vulgaris
Phvul.001G023100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1929424-1931423 Phaseolus vulgaris
Phvul.001G023100 2.0kb downstream 2.0kb downstream 4785 true Chr01: 1924639-1929423 Phaseolus vulgaris
Phvul.001G023100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1924639-1926638 Phaseolus vulgaris
Phvul.001G023100 5.0kb upstream 5.0kb upstream 7785 true Chr01: 1926639-1934423 Phaseolus vulgaris
Phvul.001G023100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1929424-1934423 Phaseolus vulgaris
Phvul.001G023100 5.0kb downstream 5.0kb downstream 7785 true Chr01: 1921639-1929423 Phaseolus vulgaris
Phvul.001G023100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1921639-1926638 Phaseolus vulgaris
Phvul.001G023100 10.0kb upstream 10.0kb upstream 12785 true Chr01: 1926639-1939423 Phaseolus vulgaris
Phvul.001G023100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1929424-1939423 Phaseolus vulgaris
Phvul.001G023100 10.0kb downstream 10.0kb downstream 12785 true Chr01: 1916639-1929423 Phaseolus vulgaris
Phvul.001G023100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1916639-1926638 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300243 5265 Fabidae View MSA
124065103 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1127 0.0 38.1083   High
cufflinks 13.375 0.0 36.2669   High
cufflinks 8.6423 0.0 24.3391   Low
cufflinks 11.8782 0.0 32.6244    
cufflinks 9.00107 0.0 25.3569   Low
cufflinks 9.23705 0.0 25.9068    
cufflinks 11.4224 0.0 31.3847    
cufflinks 10.4175 0.0 28.8815    
cufflinks 8.6414 0.0 24.3106   Low
cufflinks 12.1363 0.0 33.2288    
cufflinks 12.266 0.0 33.5651    

0 Strain