Gene : Phvul.001G026900 P. vulgaris v2.1
Defline:  (1 of 2) K18667 - activating signal cointegrator complex subunit 2 (ASCC2) Genomic Order:  272
Name:  ? Phvul.001G026900 Secondary Identifier:  ? PAC:37167881
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G026900 0.5kb upstream 0.5kb upstream 12286 true Chr01: 2384533-2396818 Phaseolus vulgaris
Phvul.001G026900 0.5kb upstream 0.5kb upstream 500 false Chr01: 2384533-2385032 Phaseolus vulgaris
Phvul.001G026900 0.5kb downstream 0.5kb downstream 12286 true Chr01: 2385033-2397318 Phaseolus vulgaris
Phvul.001G026900 0.5kb downstream 0.5kb downstream 500 false Chr01: 2396819-2397318 Phaseolus vulgaris
Phvul.001G026900 1.0kb upstream 1.0kb upstream 12786 true Chr01: 2384033-2396818 Phaseolus vulgaris
Phvul.001G026900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2384033-2385032 Phaseolus vulgaris
Phvul.001G026900 1.0kb downstream 1.0kb downstream 12786 true Chr01: 2385033-2397818 Phaseolus vulgaris
Phvul.001G026900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2396819-2397818 Phaseolus vulgaris
Phvul.001G026900 2.0kb upstream 2.0kb upstream 13786 true Chr01: 2383033-2396818 Phaseolus vulgaris
Phvul.001G026900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2383033-2385032 Phaseolus vulgaris
Phvul.001G026900 2.0kb downstream 2.0kb downstream 13786 true Chr01: 2385033-2398818 Phaseolus vulgaris
Phvul.001G026900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2396819-2398818 Phaseolus vulgaris
Phvul.001G026900 5.0kb upstream 5.0kb upstream 16786 true Chr01: 2380033-2396818 Phaseolus vulgaris
Phvul.001G026900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2380033-2385032 Phaseolus vulgaris
Phvul.001G026900 5.0kb downstream 5.0kb downstream 16786 true Chr01: 2385033-2401818 Phaseolus vulgaris
Phvul.001G026900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2396819-2401818 Phaseolus vulgaris
Phvul.001G026900 10.0kb upstream 10.0kb upstream 21786 true Chr01: 2375033-2396818 Phaseolus vulgaris
Phvul.001G026900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2375033-2385032 Phaseolus vulgaris
Phvul.001G026900 10.0kb downstream 10.0kb downstream 21786 true Chr01: 2385033-2406818 Phaseolus vulgaris
Phvul.001G026900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2396819-2406818 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303978 5265 Fabidae View MSA
124069549 5270 Rosid View MSA
123741319 5271 Pentapetalae View MSA
122794121 5272 Eudicot View MSA
122043099 5273 Angiosperm View MSA
121349744 5274 Embryophyte View MSA
123381424 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.12227 0.0 8.59684   Low
cufflinks 7.62985 0.0 19.8132    
cufflinks 5.64054 0.0 14.815    
cufflinks 2.81341 0.0 7.85193   Low
cufflinks 6.7644 0.0 17.66    
cufflinks 7.50275 0.0 19.4913    
cufflinks 8.30729 0.0 21.5259    
cufflinks 8.19657 0.0 21.2313    
cufflinks 7.4301 0.0 19.3233    
cufflinks 13.2149 0.0 34.2388   High
cufflinks 6.61789 0.0 17.3032    

0 Strain