Gene : Phvul.001G029700 P. vulgaris v2.1
Genomic Order:  299 Name:  ? Phvul.001G029700
Secondary Identifier:  ? PAC:37168029
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G029700 0.5kb upstream 0.5kb upstream 1998 true Chr01: 2644965-2646962 Phaseolus vulgaris
Phvul.001G029700 0.5kb upstream 0.5kb upstream 500 false Chr01: 2644965-2645464 Phaseolus vulgaris
Phvul.001G029700 0.5kb downstream 0.5kb downstream 1998 true Chr01: 2645465-2647462 Phaseolus vulgaris
Phvul.001G029700 0.5kb downstream 0.5kb downstream 500 false Chr01: 2646963-2647462 Phaseolus vulgaris
Phvul.001G029700 1.0kb upstream 1.0kb upstream 2498 true Chr01: 2644465-2646962 Phaseolus vulgaris
Phvul.001G029700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2644465-2645464 Phaseolus vulgaris
Phvul.001G029700 1.0kb downstream 1.0kb downstream 2498 true Chr01: 2645465-2647962 Phaseolus vulgaris
Phvul.001G029700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2646963-2647962 Phaseolus vulgaris
Phvul.001G029700 2.0kb upstream 2.0kb upstream 3498 true Chr01: 2643465-2646962 Phaseolus vulgaris
Phvul.001G029700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2643465-2645464 Phaseolus vulgaris
Phvul.001G029700 2.0kb downstream 2.0kb downstream 3498 true Chr01: 2645465-2648962 Phaseolus vulgaris
Phvul.001G029700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2646963-2648962 Phaseolus vulgaris
Phvul.001G029700 5.0kb upstream 5.0kb upstream 6498 true Chr01: 2640465-2646962 Phaseolus vulgaris
Phvul.001G029700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2640465-2645464 Phaseolus vulgaris
Phvul.001G029700 5.0kb downstream 5.0kb downstream 6498 true Chr01: 2645465-2651962 Phaseolus vulgaris
Phvul.001G029700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2646963-2651962 Phaseolus vulgaris
Phvul.001G029700 10.0kb upstream 10.0kb upstream 11498 true Chr01: 2635465-2646962 Phaseolus vulgaris
Phvul.001G029700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2635465-2645464 Phaseolus vulgaris
Phvul.001G029700 10.0kb downstream 10.0kb downstream 11498 true Chr01: 2645465-2656962 Phaseolus vulgaris
Phvul.001G029700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2646963-2656962 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311688 5265 Fabidae View MSA
124073973 5270 Rosid View MSA
123742342 5271 Pentapetalae View MSA
122794830 5272 Eudicot View MSA
122049677 5273 Angiosperm View MSA
121311536 5274 Embryophyte View MSA
123348819 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.335354 0.0 2.47956 Low  
cufflinks 0.194779 0.0 0.805993 Low  
cufflinks 6.61868 0.0 23.7443   High
cufflinks 0.0584265 0.0 0.280697 Low Low
cufflinks 0.948168 0.0 4.31993    
cufflinks 6.65223 0.0 24.0133   High
cufflinks 0.544589 0.0 2.50518 Low  
cufflinks 0.250099 0.0 1.97178 Low  
cufflinks 0.805496 0.0 4.95826    
cufflinks 0.0484515 0.0 0.239668 Low Low
cufflinks 1.48096 0.0 8.04888    

0 Strain