Gene : Phvul.001G021500 P. vulgaris v2.1
Genomic Order:  216 Name:  ? Phvul.001G021500
Secondary Identifier:  ? PAC:37168784
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G021500 0.5kb upstream 0.5kb upstream 839 true Chr01: 1724389-1725227 Phaseolus vulgaris
Phvul.001G021500 0.5kb upstream 0.5kb upstream 500 false Chr01: 1724728-1725227 Phaseolus vulgaris
Phvul.001G021500 0.5kb downstream 0.5kb downstream 839 true Chr01: 1723889-1724727 Phaseolus vulgaris
Phvul.001G021500 0.5kb downstream 0.5kb downstream 500 false Chr01: 1723889-1724388 Phaseolus vulgaris
Phvul.001G021500 1.0kb upstream 1.0kb upstream 1339 true Chr01: 1724389-1725727 Phaseolus vulgaris
Phvul.001G021500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1724728-1725727 Phaseolus vulgaris
Phvul.001G021500 1.0kb downstream 1.0kb downstream 1339 true Chr01: 1723389-1724727 Phaseolus vulgaris
Phvul.001G021500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1723389-1724388 Phaseolus vulgaris
Phvul.001G021500 2.0kb upstream 2.0kb upstream 2339 true Chr01: 1724389-1726727 Phaseolus vulgaris
Phvul.001G021500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1724728-1726727 Phaseolus vulgaris
Phvul.001G021500 2.0kb downstream 2.0kb downstream 2339 true Chr01: 1722389-1724727 Phaseolus vulgaris
Phvul.001G021500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1722389-1724388 Phaseolus vulgaris
Phvul.001G021500 5.0kb upstream 5.0kb upstream 5339 true Chr01: 1724389-1729727 Phaseolus vulgaris
Phvul.001G021500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1724728-1729727 Phaseolus vulgaris
Phvul.001G021500 5.0kb downstream 5.0kb downstream 5339 true Chr01: 1719389-1724727 Phaseolus vulgaris
Phvul.001G021500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1719389-1724388 Phaseolus vulgaris
Phvul.001G021500 10.0kb upstream 10.0kb upstream 10339 true Chr01: 1724389-1734727 Phaseolus vulgaris
Phvul.001G021500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1724728-1734727 Phaseolus vulgaris
Phvul.001G021500 10.0kb downstream 10.0kb downstream 10339 true Chr01: 1714389-1724727 Phaseolus vulgaris
Phvul.001G021500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1714389-1724388 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315344 5265 Fabidae View MSA
124072679 5270 Rosid View MSA
123744688 5271 Pentapetalae View MSA
122796930 5272 Eudicot View MSA
122050507 5273 Angiosperm View MSA
121311953 5274 Embryophyte View MSA
123349178 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 240.258 0.0 624.952 High High
cufflinks 16.87 0.0 56.5294    
cufflinks 16.7083 0.0 55.777    
cufflinks 130.131 0.0 350.79 High High
cufflinks 23.4487 0.0 76.5719    
cufflinks 4.14427 0.0 15.8523    
cufflinks 6.04184 0.0 22.3989    
cufflinks 1.95069 0.0 7.8832   Low
cufflinks 9.28573 0.0 33.0518    
cufflinks 7.23846 0.0 26.6144    
cufflinks 14.8538 0.0 50.6619    

0 Strain