Gene : Phvul.001G021750 P. vulgaris v2.1
Defline:  (1 of 7) PF00036 - EF hand (EF-hand_1) Genomic Order:  220
Name:  ? Phvul.001G021750 Secondary Identifier:  ? PAC:37170232
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G021750 0.5kb upstream 0.5kb upstream 1108 true Chr01: 1753173-1754280 Phaseolus vulgaris
Phvul.001G021750 0.5kb upstream 0.5kb upstream 500 false Chr01: 1753781-1754280 Phaseolus vulgaris
Phvul.001G021750 0.5kb downstream 0.5kb downstream 1108 true Chr01: 1752673-1753780 Phaseolus vulgaris
Phvul.001G021750 0.5kb downstream 0.5kb downstream 500 false Chr01: 1752673-1753172 Phaseolus vulgaris
Phvul.001G021750 1.0kb upstream 1.0kb upstream 1608 true Chr01: 1753173-1754780 Phaseolus vulgaris
Phvul.001G021750 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1753781-1754780 Phaseolus vulgaris
Phvul.001G021750 1.0kb downstream 1.0kb downstream 1608 true Chr01: 1752173-1753780 Phaseolus vulgaris
Phvul.001G021750 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1752173-1753172 Phaseolus vulgaris
Phvul.001G021750 2.0kb upstream 2.0kb upstream 2608 true Chr01: 1753173-1755780 Phaseolus vulgaris
Phvul.001G021750 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1753781-1755780 Phaseolus vulgaris
Phvul.001G021750 2.0kb downstream 2.0kb downstream 2608 true Chr01: 1751173-1753780 Phaseolus vulgaris
Phvul.001G021750 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1751173-1753172 Phaseolus vulgaris
Phvul.001G021750 5.0kb upstream 5.0kb upstream 5608 true Chr01: 1753173-1758780 Phaseolus vulgaris
Phvul.001G021750 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1753781-1758780 Phaseolus vulgaris
Phvul.001G021750 5.0kb downstream 5.0kb downstream 5608 true Chr01: 1748173-1753780 Phaseolus vulgaris
Phvul.001G021750 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1748173-1753172 Phaseolus vulgaris
Phvul.001G021750 10.0kb upstream 10.0kb upstream 10608 true Chr01: 1753173-1763780 Phaseolus vulgaris
Phvul.001G021750 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1753781-1763780 Phaseolus vulgaris
Phvul.001G021750 10.0kb downstream 10.0kb downstream 10608 true Chr01: 1743173-1753780 Phaseolus vulgaris
Phvul.001G021750 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1743173-1753172 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315344 5265 Fabidae View MSA
124072679 5270 Rosid View MSA
123744688 5271 Pentapetalae View MSA
122796930 5272 Eudicot View MSA
122050507 5273 Angiosperm View MSA
121311953 5274 Embryophyte View MSA
123349178 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4809 0.0 59.4185    
cufflinks 10.0494 0.0 31.6079    
cufflinks 25.4532 0.0 71.9442   High
cufflinks 1.6215 0.0 6.15768   Low
cufflinks 29.6748 0.0 83.6371   High
cufflinks 2.29218 0.0 8.42704   Low
cufflinks 5.83911 0.0 19.5052    
cufflinks 3.11736 0.0 11.0836    
cufflinks 3.34982 0.0 11.8873    
cufflinks 20.5374 0.0 59.8434    
cufflinks 23.0249 0.0 66.3719    

0 Strain