Gene : Phvul.001G020400 P. vulgaris v2.1
Defline:  (1 of 2) K03030 - 26S proteasome regulatory subunit N11 (PSMD14, RPN11, POH1) Genomic Order:  206
Name:  ? Phvul.001G020400 Secondary Identifier:  ? PAC:37171197
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G020400 0.5kb upstream 0.5kb upstream 3816 true Chr01: 1661762-1665577 Phaseolus vulgaris
Phvul.001G020400 0.5kb upstream 0.5kb upstream 500 false Chr01: 1661762-1662261 Phaseolus vulgaris
Phvul.001G020400 0.5kb downstream 0.5kb downstream 3816 true Chr01: 1662262-1666077 Phaseolus vulgaris
Phvul.001G020400 0.5kb downstream 0.5kb downstream 500 false Chr01: 1665578-1666077 Phaseolus vulgaris
Phvul.001G020400 1.0kb upstream 1.0kb upstream 4316 true Chr01: 1661262-1665577 Phaseolus vulgaris
Phvul.001G020400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1661262-1662261 Phaseolus vulgaris
Phvul.001G020400 1.0kb downstream 1.0kb downstream 4316 true Chr01: 1662262-1666577 Phaseolus vulgaris
Phvul.001G020400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1665578-1666577 Phaseolus vulgaris
Phvul.001G020400 2.0kb upstream 2.0kb upstream 5316 true Chr01: 1660262-1665577 Phaseolus vulgaris
Phvul.001G020400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1660262-1662261 Phaseolus vulgaris
Phvul.001G020400 2.0kb downstream 2.0kb downstream 5316 true Chr01: 1662262-1667577 Phaseolus vulgaris
Phvul.001G020400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1665578-1667577 Phaseolus vulgaris
Phvul.001G020400 5.0kb upstream 5.0kb upstream 8316 true Chr01: 1657262-1665577 Phaseolus vulgaris
Phvul.001G020400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1657262-1662261 Phaseolus vulgaris
Phvul.001G020400 5.0kb downstream 5.0kb downstream 8316 true Chr01: 1662262-1670577 Phaseolus vulgaris
Phvul.001G020400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1665578-1670577 Phaseolus vulgaris
Phvul.001G020400 10.0kb upstream 10.0kb upstream 13316 true Chr01: 1652262-1665577 Phaseolus vulgaris
Phvul.001G020400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1652262-1662261 Phaseolus vulgaris
Phvul.001G020400 10.0kb downstream 10.0kb downstream 13316 true Chr01: 1662262-1675577 Phaseolus vulgaris
Phvul.001G020400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1665578-1675577 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314386 5265 Fabidae View MSA
124066458 5270 Rosid View MSA
123745798 5271 Pentapetalae View MSA
122796547 5272 Eudicot View MSA
122046173 5273 Angiosperm View MSA
121348836 5274 Embryophyte View MSA
123424358 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.881 0.0 127.316 High  
cufflinks 36.6814 0.0 94.8608 High  
cufflinks 25.4521 0.0 66.0001   Low
cufflinks 52.9341 0.0 138.118 High High
cufflinks 34.2555 0.0 88.5464 High  
cufflinks 31.1143 0.0 80.4421    
cufflinks 44.9199 0.0 116.728 High  
cufflinks 46.1474 0.0 119.957 High  
cufflinks 49.9914 0.0 130.379 High  
cufflinks 25.7739 0.0 66.8156   Low
cufflinks 44.9326 0.0 116.671 High  

0 Strain