Gene : Phvul.001G004700 P. vulgaris v2.1
Genomic Order:  46 Name:  ? Phvul.001G004700
Secondary Identifier:  ? PAC:37169041
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G004700 0.5kb upstream 0.5kb upstream 3824 true Chr01: 301919-305742 Phaseolus vulgaris
Phvul.001G004700 0.5kb upstream 0.5kb upstream 500 false Chr01: 301919-302418 Phaseolus vulgaris
Phvul.001G004700 0.5kb downstream 0.5kb downstream 3824 true Chr01: 302419-306242 Phaseolus vulgaris
Phvul.001G004700 0.5kb downstream 0.5kb downstream 500 false Chr01: 305743-306242 Phaseolus vulgaris
Phvul.001G004700 1.0kb upstream 1.0kb upstream 4324 true Chr01: 301419-305742 Phaseolus vulgaris
Phvul.001G004700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 301419-302418 Phaseolus vulgaris
Phvul.001G004700 1.0kb downstream 1.0kb downstream 4324 true Chr01: 302419-306742 Phaseolus vulgaris
Phvul.001G004700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 305743-306742 Phaseolus vulgaris
Phvul.001G004700 2.0kb upstream 2.0kb upstream 5324 true Chr01: 300419-305742 Phaseolus vulgaris
Phvul.001G004700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 300419-302418 Phaseolus vulgaris
Phvul.001G004700 2.0kb downstream 2.0kb downstream 5324 true Chr01: 302419-307742 Phaseolus vulgaris
Phvul.001G004700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 305743-307742 Phaseolus vulgaris
Phvul.001G004700 5.0kb upstream 5.0kb upstream 8324 true Chr01: 297419-305742 Phaseolus vulgaris
Phvul.001G004700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 297419-302418 Phaseolus vulgaris
Phvul.001G004700 5.0kb downstream 5.0kb downstream 8324 true Chr01: 302419-310742 Phaseolus vulgaris
Phvul.001G004700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 305743-310742 Phaseolus vulgaris
Phvul.001G004700 10.0kb upstream 10.0kb upstream 13324 true Chr01: 292419-305742 Phaseolus vulgaris
Phvul.001G004700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 292419-302418 Phaseolus vulgaris
Phvul.001G004700 10.0kb downstream 10.0kb downstream 13324 true Chr01: 302419-315742 Phaseolus vulgaris
Phvul.001G004700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 305743-315742 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254524 5265 Fabidae View MSA
123996646 5270 Rosid View MSA
123748116 5271 Pentapetalae View MSA
122796381 5272 Eudicot View MSA
122050791 5273 Angiosperm View MSA
121349509 5274 Embryophyte View MSA
123381337 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.94606 0.0 27.3247    
cufflinks 10.6061 0.0 34.4487    
cufflinks 10.4149 0.0 31.1734    
cufflinks 5.7223 0.0 18.0706   Low
cufflinks 11.7888 0.0 38.2231    
cufflinks 12.4226 0.0 36.2283    
cufflinks 22.5694 0.0 65.8334   High
cufflinks 20.0768 0.0 59.1446    
cufflinks 15.2113 0.0 51.1392    
cufflinks 28.7958 0.0 85.1855   High
cufflinks 10.2958 0.0 31.5914    

0 Strain