Gene : Phvul.001G009400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10992//PTHR10992:SF866 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  93
Name:  ? Phvul.001G009400 Secondary Identifier:  ? PAC:37170767
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1319 Phaseolus vulgaris pathologic  
Pvulgaris PWY4FS-7 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7411 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7417 Phaseolus vulgaris pathologic  
Pvulgaris TRIGLSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G009400 0.5kb upstream 0.5kb upstream 4178 true Chr01: 708604-712781 Phaseolus vulgaris
Phvul.001G009400 0.5kb upstream 0.5kb upstream 500 false Chr01: 708604-709103 Phaseolus vulgaris
Phvul.001G009400 0.5kb downstream 0.5kb downstream 4178 true Chr01: 709104-713281 Phaseolus vulgaris
Phvul.001G009400 0.5kb downstream 0.5kb downstream 500 false Chr01: 712782-713281 Phaseolus vulgaris
Phvul.001G009400 1.0kb upstream 1.0kb upstream 4678 true Chr01: 708104-712781 Phaseolus vulgaris
Phvul.001G009400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 708104-709103 Phaseolus vulgaris
Phvul.001G009400 1.0kb downstream 1.0kb downstream 4678 true Chr01: 709104-713781 Phaseolus vulgaris
Phvul.001G009400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 712782-713781 Phaseolus vulgaris
Phvul.001G009400 2.0kb upstream 2.0kb upstream 5678 true Chr01: 707104-712781 Phaseolus vulgaris
Phvul.001G009400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 707104-709103 Phaseolus vulgaris
Phvul.001G009400 2.0kb downstream 2.0kb downstream 5678 true Chr01: 709104-714781 Phaseolus vulgaris
Phvul.001G009400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 712782-714781 Phaseolus vulgaris
Phvul.001G009400 5.0kb upstream 5.0kb upstream 8678 true Chr01: 704104-712781 Phaseolus vulgaris
Phvul.001G009400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 704104-709103 Phaseolus vulgaris
Phvul.001G009400 5.0kb downstream 5.0kb downstream 8678 true Chr01: 709104-717781 Phaseolus vulgaris
Phvul.001G009400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 712782-717781 Phaseolus vulgaris
Phvul.001G009400 10.0kb upstream 10.0kb upstream 13678 true Chr01: 699104-712781 Phaseolus vulgaris
Phvul.001G009400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 699104-709103 Phaseolus vulgaris
Phvul.001G009400 10.0kb downstream 10.0kb downstream 13678 true Chr01: 709104-722781 Phaseolus vulgaris
Phvul.001G009400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 712782-722781 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310486 5265 Fabidae View MSA
124066617 5270 Rosid View MSA
123747247 5271 Pentapetalae View MSA
122792153 5272 Eudicot View MSA
122042998 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121347708 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.6199 0.0 76.8389   High
cufflinks 8.02908 0.0 22.9486   Low
cufflinks 16.0905 0.0 43.2588    
cufflinks 9.76768 0.0 27.4309    
cufflinks 9.25561 0.0 26.2469    
cufflinks 9.02891 0.0 25.5302   Low
cufflinks 23.5244 0.0 61.6158   High
cufflinks 14.1665 0.0 38.3406    
cufflinks 21.7686 0.0 57.3315    
cufflinks 17.8865 0.0 47.6771    
cufflinks 11.5187 0.0 31.9337    

0 Strain