Gene : Phvul.001G011800 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  117
Name:  ? Phvul.001G011800 Secondary Identifier:  ? PAC:37170002
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G011800 0.5kb upstream 0.5kb upstream 971 true Chr01: 901678-902648 Phaseolus vulgaris
Phvul.001G011800 0.5kb upstream 0.5kb upstream 500 false Chr01: 902149-902648 Phaseolus vulgaris
Phvul.001G011800 0.5kb downstream 0.5kb downstream 971 true Chr01: 901178-902148 Phaseolus vulgaris
Phvul.001G011800 0.5kb downstream 0.5kb downstream 500 false Chr01: 901178-901677 Phaseolus vulgaris
Phvul.001G011800 1.0kb upstream 1.0kb upstream 1471 true Chr01: 901678-903148 Phaseolus vulgaris
Phvul.001G011800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 902149-903148 Phaseolus vulgaris
Phvul.001G011800 1.0kb downstream 1.0kb downstream 1471 true Chr01: 900678-902148 Phaseolus vulgaris
Phvul.001G011800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 900678-901677 Phaseolus vulgaris
Phvul.001G011800 2.0kb upstream 2.0kb upstream 2471 true Chr01: 901678-904148 Phaseolus vulgaris
Phvul.001G011800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 902149-904148 Phaseolus vulgaris
Phvul.001G011800 2.0kb downstream 2.0kb downstream 2471 true Chr01: 899678-902148 Phaseolus vulgaris
Phvul.001G011800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 899678-901677 Phaseolus vulgaris
Phvul.001G011800 5.0kb upstream 5.0kb upstream 5471 true Chr01: 901678-907148 Phaseolus vulgaris
Phvul.001G011800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 902149-907148 Phaseolus vulgaris
Phvul.001G011800 5.0kb downstream 5.0kb downstream 5471 true Chr01: 896678-902148 Phaseolus vulgaris
Phvul.001G011800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 896678-901677 Phaseolus vulgaris
Phvul.001G011800 10.0kb upstream 10.0kb upstream 10471 true Chr01: 901678-912148 Phaseolus vulgaris
Phvul.001G011800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 902149-912148 Phaseolus vulgaris
Phvul.001G011800 10.0kb downstream 10.0kb downstream 10471 true Chr01: 891678-902148 Phaseolus vulgaris
Phvul.001G011800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 891678-901677 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313367 5265 Fabidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.29657 0.0 18.3856    
cufflinks 19.5671 0.0 58.1439    
cufflinks 3.9774 0.0 14.1662   Low
cufflinks 7.14367 0.0 23.6359    
cufflinks 4.29657 0.0 15.2488    
cufflinks 25.6318 0.0 74.031    
cufflinks 34.7214 0.0 96.9915 High High
cufflinks 51.9621 0.0 140.349 High High
cufflinks 11.6703 0.0 36.4957    
cufflinks 2.61748 0.0 9.70794   Low
cufflinks 24.9279 0.0 72.1332    

0 Strain