Gene : Phvul.001G106433 P. vulgaris v2.1
Defline:  (1 of 2) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B) Genomic Order:  1033
Name:  ? Phvul.001G106433 Secondary Identifier:  ? PAC:37170335
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G106433 0.5kb upstream 0.5kb upstream 23386 true Chr01: 26046440-26069825 Phaseolus vulgaris
Phvul.001G106433 0.5kb upstream 0.5kb upstream 500 false Chr01: 26069326-26069825 Phaseolus vulgaris
Phvul.001G106433 0.5kb downstream 0.5kb downstream 23386 true Chr01: 26045940-26069325 Phaseolus vulgaris
Phvul.001G106433 0.5kb downstream 0.5kb downstream 500 false Chr01: 26045940-26046439 Phaseolus vulgaris
Phvul.001G106433 1.0kb upstream 1.0kb upstream 23886 true Chr01: 26046440-26070325 Phaseolus vulgaris
Phvul.001G106433 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26069326-26070325 Phaseolus vulgaris
Phvul.001G106433 1.0kb downstream 1.0kb downstream 23886 true Chr01: 26045440-26069325 Phaseolus vulgaris
Phvul.001G106433 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26045440-26046439 Phaseolus vulgaris
Phvul.001G106433 2.0kb upstream 2.0kb upstream 24886 true Chr01: 26046440-26071325 Phaseolus vulgaris
Phvul.001G106433 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26069326-26071325 Phaseolus vulgaris
Phvul.001G106433 2.0kb downstream 2.0kb downstream 24886 true Chr01: 26044440-26069325 Phaseolus vulgaris
Phvul.001G106433 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26044440-26046439 Phaseolus vulgaris
Phvul.001G106433 5.0kb upstream 5.0kb upstream 27886 true Chr01: 26046440-26074325 Phaseolus vulgaris
Phvul.001G106433 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26069326-26074325 Phaseolus vulgaris
Phvul.001G106433 5.0kb downstream 5.0kb downstream 27886 true Chr01: 26041440-26069325 Phaseolus vulgaris
Phvul.001G106433 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26041440-26046439 Phaseolus vulgaris
Phvul.001G106433 10.0kb upstream 10.0kb upstream 32886 true Chr01: 26046440-26079325 Phaseolus vulgaris
Phvul.001G106433 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26069326-26079325 Phaseolus vulgaris
Phvul.001G106433 10.0kb downstream 10.0kb downstream 32886 true Chr01: 26036440-26069325 Phaseolus vulgaris
Phvul.001G106433 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26036440-26046439 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311198 5265 Fabidae View MSA
124069197 5270 Rosid View MSA
123746124 5271 Pentapetalae View MSA
122796668 5272 Eudicot View MSA
122049145 5273 Angiosperm View MSA
121351360 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76761 0.0 22.5336    
cufflinks 5.02381 0.0 25.6045    
cufflinks 6.50059 0.0 22.7495    
cufflinks 2.68985 0.0 10.1753   Low
cufflinks 4.93069 0.0 20.6764    
cufflinks 6.35892 0.0 28.9319    
cufflinks 6.92842 0.0 28.572    
cufflinks 5.59516 0.0 22.5824    
cufflinks 5.49086 0.0 22.5923    
cufflinks 7.47511 0.0 25.7116   High
cufflinks 4.48027 0.0 20.9778    

0 Strain