Gene : Phvul.001G105633 P. vulgaris v2.1
Defline:  (1 of 2) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase Genomic Order:  1040
Name:  ? Phvul.001G105633 Secondary Identifier:  ? PAC:37168938
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G105633 0.5kb upstream 0.5kb upstream 62148 true Chr01: 26347743-26409890 Phaseolus vulgaris
Phvul.001G105633 0.5kb upstream 0.5kb upstream 500 false Chr01: 26347743-26348242 Phaseolus vulgaris
Phvul.001G105633 0.5kb downstream 0.5kb downstream 62148 true Chr01: 26348243-26410390 Phaseolus vulgaris
Phvul.001G105633 0.5kb downstream 0.5kb downstream 500 false Chr01: 26409891-26410390 Phaseolus vulgaris
Phvul.001G105633 1.0kb upstream 1.0kb upstream 62648 true Chr01: 26347243-26409890 Phaseolus vulgaris
Phvul.001G105633 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26347243-26348242 Phaseolus vulgaris
Phvul.001G105633 1.0kb downstream 1.0kb downstream 62648 true Chr01: 26348243-26410890 Phaseolus vulgaris
Phvul.001G105633 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26409891-26410890 Phaseolus vulgaris
Phvul.001G105633 2.0kb upstream 2.0kb upstream 63648 true Chr01: 26346243-26409890 Phaseolus vulgaris
Phvul.001G105633 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26346243-26348242 Phaseolus vulgaris
Phvul.001G105633 2.0kb downstream 2.0kb downstream 63648 true Chr01: 26348243-26411890 Phaseolus vulgaris
Phvul.001G105633 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26409891-26411890 Phaseolus vulgaris
Phvul.001G105633 5.0kb upstream 5.0kb upstream 66648 true Chr01: 26343243-26409890 Phaseolus vulgaris
Phvul.001G105633 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26343243-26348242 Phaseolus vulgaris
Phvul.001G105633 5.0kb downstream 5.0kb downstream 66648 true Chr01: 26348243-26414890 Phaseolus vulgaris
Phvul.001G105633 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26409891-26414890 Phaseolus vulgaris
Phvul.001G105633 10.0kb upstream 10.0kb upstream 71648 true Chr01: 26338243-26409890 Phaseolus vulgaris
Phvul.001G105633 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26338243-26348242 Phaseolus vulgaris
Phvul.001G105633 10.0kb downstream 10.0kb downstream 71648 true Chr01: 26348243-26419890 Phaseolus vulgaris
Phvul.001G105633 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26409891-26419890 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299800 5265 Fabidae View MSA
124068543 5270 Rosid View MSA
123753012 5271 Pentapetalae View MSA
122789022 5272 Eudicot View MSA
122046246 5273 Angiosperm View MSA
121345190 5274 Embryophyte View MSA
123425346 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.46957 0.0 16.1315    
cufflinks 10.4621 0.0 33.8813    
cufflinks 35.2152 0.0 127.078   High
cufflinks 2.5692 0.0 9.22701   Low
cufflinks 8.37146 0.0 27.717    
cufflinks 37.7296 0.0 138.153 High High
cufflinks 3.86737 0.0 14.4429    
cufflinks 3.57265 0.0 13.4681    
cufflinks 3.07597 0.0 12.2563    
cufflinks 11.4109 0.0 36.8284    
cufflinks 6.49503 0.0 22.6971    

0 Strain