Gene : Phvul.001G108200 P. vulgaris v2.1
Defline:  (1 of 6) PTHR11206:SF102 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1013
Name:  ? Phvul.001G108200 Secondary Identifier:  ? PAC:37169822
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G108200 0.5kb upstream 0.5kb upstream 4496 true Chr01: 23373309-23377804 Phaseolus vulgaris
Phvul.001G108200 0.5kb upstream 0.5kb upstream 500 false Chr01: 23377305-23377804 Phaseolus vulgaris
Phvul.001G108200 0.5kb downstream 0.5kb downstream 4496 true Chr01: 23372809-23377304 Phaseolus vulgaris
Phvul.001G108200 0.5kb downstream 0.5kb downstream 500 false Chr01: 23372809-23373308 Phaseolus vulgaris
Phvul.001G108200 1.0kb upstream 1.0kb upstream 4996 true Chr01: 23373309-23378304 Phaseolus vulgaris
Phvul.001G108200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23377305-23378304 Phaseolus vulgaris
Phvul.001G108200 1.0kb downstream 1.0kb downstream 4996 true Chr01: 23372309-23377304 Phaseolus vulgaris
Phvul.001G108200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23372309-23373308 Phaseolus vulgaris
Phvul.001G108200 2.0kb upstream 2.0kb upstream 5996 true Chr01: 23373309-23379304 Phaseolus vulgaris
Phvul.001G108200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23377305-23379304 Phaseolus vulgaris
Phvul.001G108200 2.0kb downstream 2.0kb downstream 5996 true Chr01: 23371309-23377304 Phaseolus vulgaris
Phvul.001G108200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23371309-23373308 Phaseolus vulgaris
Phvul.001G108200 5.0kb upstream 5.0kb upstream 8996 true Chr01: 23373309-23382304 Phaseolus vulgaris
Phvul.001G108200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23377305-23382304 Phaseolus vulgaris
Phvul.001G108200 5.0kb downstream 5.0kb downstream 8996 true Chr01: 23368309-23377304 Phaseolus vulgaris
Phvul.001G108200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23368309-23373308 Phaseolus vulgaris
Phvul.001G108200 10.0kb upstream 10.0kb upstream 13996 true Chr01: 23373309-23387304 Phaseolus vulgaris
Phvul.001G108200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23377305-23387304 Phaseolus vulgaris
Phvul.001G108200 10.0kb downstream 10.0kb downstream 13996 true Chr01: 23363309-23377304 Phaseolus vulgaris
Phvul.001G108200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23363309-23373308 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296909 5265 Fabidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.877725 0.0 3.15218    
cufflinks 1.19847 0.0 4.16463    
cufflinks 5.40528 0.0 15.7737    
cufflinks 0.146808 0.0 0.613589 Low Low
cufflinks 0.921195 0.0 3.29708    
cufflinks 14.5287 0.0 38.8531   High
cufflinks 5.85009 0.0 17.0408    
cufflinks 17.3188 0.0 45.7154   High
cufflinks 2.43462 0.0 7.85346    
cufflinks 5.26397 0.0 15.4508    
cufflinks 0.762964 0.0 2.78124    

0 Strain