Gene : Phvul.001G097800 P. vulgaris v2.1
Defline:  (1 of 1) K01895 - acetyl-CoA synthetase (ACSS, acs) Genomic Order:  950
Name:  ? Phvul.001G097800 Secondary Identifier:  ? PAC:37171271
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY66-21 Phaseolus vulgaris pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G097800 0.5kb upstream 0.5kb upstream 10449 true Chr01: 18757571-18768019 Phaseolus vulgaris
Phvul.001G097800 0.5kb upstream 0.5kb upstream 500 false Chr01: 18767520-18768019 Phaseolus vulgaris
Phvul.001G097800 0.5kb downstream 0.5kb downstream 10449 true Chr01: 18757071-18767519 Phaseolus vulgaris
Phvul.001G097800 0.5kb downstream 0.5kb downstream 500 false Chr01: 18757071-18757570 Phaseolus vulgaris
Phvul.001G097800 1.0kb upstream 1.0kb upstream 10949 true Chr01: 18757571-18768519 Phaseolus vulgaris
Phvul.001G097800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18767520-18768519 Phaseolus vulgaris
Phvul.001G097800 1.0kb downstream 1.0kb downstream 10949 true Chr01: 18756571-18767519 Phaseolus vulgaris
Phvul.001G097800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18756571-18757570 Phaseolus vulgaris
Phvul.001G097800 2.0kb upstream 2.0kb upstream 11949 true Chr01: 18757571-18769519 Phaseolus vulgaris
Phvul.001G097800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18767520-18769519 Phaseolus vulgaris
Phvul.001G097800 2.0kb downstream 2.0kb downstream 11949 true Chr01: 18755571-18767519 Phaseolus vulgaris
Phvul.001G097800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18755571-18757570 Phaseolus vulgaris
Phvul.001G097800 5.0kb upstream 5.0kb upstream 14949 true Chr01: 18757571-18772519 Phaseolus vulgaris
Phvul.001G097800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18767520-18772519 Phaseolus vulgaris
Phvul.001G097800 5.0kb downstream 5.0kb downstream 14949 true Chr01: 18752571-18767519 Phaseolus vulgaris
Phvul.001G097800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18752571-18757570 Phaseolus vulgaris
Phvul.001G097800 10.0kb upstream 10.0kb upstream 19949 true Chr01: 18757571-18777519 Phaseolus vulgaris
Phvul.001G097800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18767520-18777519 Phaseolus vulgaris
Phvul.001G097800 10.0kb downstream 10.0kb downstream 19949 true Chr01: 18747571-18767519 Phaseolus vulgaris
Phvul.001G097800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18747571-18757570 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303292 5265 Fabidae View MSA
124065659 5270 Rosid View MSA
123746880 5271 Pentapetalae View MSA
122789146 5272 Eudicot View MSA
122041906 5273 Angiosperm View MSA
121351540 5274 Embryophyte View MSA
123424340 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5792 0.0 48.4694   Low
cufflinks 32.2101 0.0 106.513    
cufflinks 32.2188 0.0 106.816    
cufflinks 35.0001 0.0 115.618 High  
cufflinks 21.401 0.0 67.2321    
cufflinks 21.5439 0.0 67.8507    
cufflinks 25.099 0.0 80.052    
cufflinks 29.9568 0.0 98.5805 High  
cufflinks 34.4863 0.0 114.937 High  
cufflinks 85.4312 0.0 354.811 High High
cufflinks 23.4677 0.0 74.1483    

0 Strain