Gene : Phvul.001G101400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31810:SF2 - METACASPASE-9 Genomic Order:  983
Name:  ? Phvul.001G101400 Secondary Identifier:  ? PAC:37170401
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Ontology Annotation Displayer

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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G101400 0.5kb upstream 0.5kb upstream 1965 true Chr01: 20706841-20708805 Phaseolus vulgaris
Phvul.001G101400 0.5kb upstream 0.5kb upstream 500 false Chr01: 20706841-20707340 Phaseolus vulgaris
Phvul.001G101400 0.5kb downstream 0.5kb downstream 1965 true Chr01: 20707341-20709305 Phaseolus vulgaris
Phvul.001G101400 0.5kb downstream 0.5kb downstream 500 false Chr01: 20708806-20709305 Phaseolus vulgaris
Phvul.001G101400 1.0kb upstream 1.0kb upstream 2465 true Chr01: 20706341-20708805 Phaseolus vulgaris
Phvul.001G101400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20706341-20707340 Phaseolus vulgaris
Phvul.001G101400 1.0kb downstream 1.0kb downstream 2465 true Chr01: 20707341-20709805 Phaseolus vulgaris
Phvul.001G101400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20708806-20709805 Phaseolus vulgaris
Phvul.001G101400 2.0kb upstream 2.0kb upstream 3465 true Chr01: 20705341-20708805 Phaseolus vulgaris
Phvul.001G101400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20705341-20707340 Phaseolus vulgaris
Phvul.001G101400 2.0kb downstream 2.0kb downstream 3465 true Chr01: 20707341-20710805 Phaseolus vulgaris
Phvul.001G101400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20708806-20710805 Phaseolus vulgaris
Phvul.001G101400 5.0kb upstream 5.0kb upstream 6465 true Chr01: 20702341-20708805 Phaseolus vulgaris
Phvul.001G101400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20702341-20707340 Phaseolus vulgaris
Phvul.001G101400 5.0kb downstream 5.0kb downstream 6465 true Chr01: 20707341-20713805 Phaseolus vulgaris
Phvul.001G101400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20708806-20713805 Phaseolus vulgaris
Phvul.001G101400 10.0kb upstream 10.0kb upstream 11465 true Chr01: 20697341-20708805 Phaseolus vulgaris
Phvul.001G101400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20697341-20707340 Phaseolus vulgaris
Phvul.001G101400 10.0kb downstream 10.0kb downstream 11465 true Chr01: 20707341-20718805 Phaseolus vulgaris
Phvul.001G101400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20708806-20718805 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307116 5265 Fabidae View MSA
124068471 5270 Rosid View MSA
123742985 5271 Pentapetalae View MSA
122785731 5272 Eudicot View MSA
122044719 5273 Angiosperm View MSA
121310334 5274 Embryophyte View MSA
123426896 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 666.141 0.0 2571.48 High High
cufflinks 103.076 0.0 285.864 High  
cufflinks 5.88901 0.0 16.888    
cufflinks 99.9866 0.0 275.938 High  
cufflinks 51.7365 0.0 135.597 High  
cufflinks 3.75762 0.0 11.2889    
cufflinks 5.29419 0.0 15.2055    
cufflinks 0.782596 0.0 2.80027   Low
cufflinks 21.2364 0.0 55.0641    
cufflinks 529.748 0.0 1934.39 High High
cufflinks 19.1593 0.0 49.9259    

0 Strain