Gene : Phvul.001G105300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33432:SF3 - EMSY N TERMINUS AND PLANT TUDOR-LIKE DOMAIN-CONTAINING PROTEIN Genomic Order:  1039
Name:  ? Phvul.001G105300 Secondary Identifier:  ? PAC:37169882
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G105300 0.5kb upstream 0.5kb upstream 6139 true Chr01: 26326717-26332855 Phaseolus vulgaris
Phvul.001G105300 0.5kb upstream 0.5kb upstream 500 false Chr01: 26332356-26332855 Phaseolus vulgaris
Phvul.001G105300 0.5kb downstream 0.5kb downstream 6139 true Chr01: 26326217-26332355 Phaseolus vulgaris
Phvul.001G105300 0.5kb downstream 0.5kb downstream 500 false Chr01: 26326217-26326716 Phaseolus vulgaris
Phvul.001G105300 1.0kb upstream 1.0kb upstream 6639 true Chr01: 26326717-26333355 Phaseolus vulgaris
Phvul.001G105300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26332356-26333355 Phaseolus vulgaris
Phvul.001G105300 1.0kb downstream 1.0kb downstream 6639 true Chr01: 26325717-26332355 Phaseolus vulgaris
Phvul.001G105300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26325717-26326716 Phaseolus vulgaris
Phvul.001G105300 2.0kb upstream 2.0kb upstream 7639 true Chr01: 26326717-26334355 Phaseolus vulgaris
Phvul.001G105300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26332356-26334355 Phaseolus vulgaris
Phvul.001G105300 2.0kb downstream 2.0kb downstream 7639 true Chr01: 26324717-26332355 Phaseolus vulgaris
Phvul.001G105300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26324717-26326716 Phaseolus vulgaris
Phvul.001G105300 5.0kb upstream 5.0kb upstream 10639 true Chr01: 26326717-26337355 Phaseolus vulgaris
Phvul.001G105300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26332356-26337355 Phaseolus vulgaris
Phvul.001G105300 5.0kb downstream 5.0kb downstream 10639 true Chr01: 26321717-26332355 Phaseolus vulgaris
Phvul.001G105300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26321717-26326716 Phaseolus vulgaris
Phvul.001G105300 10.0kb upstream 10.0kb upstream 15639 true Chr01: 26326717-26342355 Phaseolus vulgaris
Phvul.001G105300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26332356-26342355 Phaseolus vulgaris
Phvul.001G105300 10.0kb downstream 10.0kb downstream 15639 true Chr01: 26316717-26332355 Phaseolus vulgaris
Phvul.001G105300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26316717-26326716 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254870 5265 Fabidae View MSA
124072836 5270 Rosid View MSA
123646908 5271 Pentapetalae View MSA
122680934 5272 Eudicot View MSA
122051103 5273 Angiosperm View MSA
121351080 5274 Embryophyte View MSA
123428685 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199548 0.0 0.831215 Low  
cufflinks 0.986821 0.0 4.33234    
cufflinks 6.25724 0.0 23.3165   High
cufflinks 0.353343 0.0 1.42076 Low  
cufflinks 0.488111 0.0 1.90679 Low  
cufflinks 2.01754 0.0 8.17224   High
cufflinks 0.226996 0.0 0.936976 Low  
cufflinks 0.229216 0.0 0.93664 Low  
cufflinks 0.21782 0.0 0.911226 Low  
cufflinks 0.0891212 0.0 0.408172 Low Low
cufflinks 0.831369 0.0 5.36138    

0 Strain