Gene : Phvul.001G104500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1046
Name:  ? Phvul.001G104500 Secondary Identifier:  ? PAC:37170260
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G104500 0.5kb upstream 0.5kb upstream 5451 true Chr01: 26567141-26572591 Phaseolus vulgaris
Phvul.001G104500 0.5kb upstream 0.5kb upstream 500 false Chr01: 26572092-26572591 Phaseolus vulgaris
Phvul.001G104500 0.5kb downstream 0.5kb downstream 5451 true Chr01: 26566641-26572091 Phaseolus vulgaris
Phvul.001G104500 0.5kb downstream 0.5kb downstream 500 false Chr01: 26566641-26567140 Phaseolus vulgaris
Phvul.001G104500 1.0kb upstream 1.0kb upstream 5951 true Chr01: 26567141-26573091 Phaseolus vulgaris
Phvul.001G104500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26572092-26573091 Phaseolus vulgaris
Phvul.001G104500 1.0kb downstream 1.0kb downstream 5951 true Chr01: 26566141-26572091 Phaseolus vulgaris
Phvul.001G104500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26566141-26567140 Phaseolus vulgaris
Phvul.001G104500 2.0kb upstream 2.0kb upstream 6951 true Chr01: 26567141-26574091 Phaseolus vulgaris
Phvul.001G104500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26572092-26574091 Phaseolus vulgaris
Phvul.001G104500 2.0kb downstream 2.0kb downstream 6951 true Chr01: 26565141-26572091 Phaseolus vulgaris
Phvul.001G104500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26565141-26567140 Phaseolus vulgaris
Phvul.001G104500 5.0kb upstream 5.0kb upstream 9951 true Chr01: 26567141-26577091 Phaseolus vulgaris
Phvul.001G104500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26572092-26577091 Phaseolus vulgaris
Phvul.001G104500 5.0kb downstream 5.0kb downstream 9951 true Chr01: 26562141-26572091 Phaseolus vulgaris
Phvul.001G104500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26562141-26567140 Phaseolus vulgaris
Phvul.001G104500 10.0kb upstream 10.0kb upstream 14951 true Chr01: 26567141-26582091 Phaseolus vulgaris
Phvul.001G104500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26572092-26582091 Phaseolus vulgaris
Phvul.001G104500 10.0kb downstream 10.0kb downstream 14951 true Chr01: 26557141-26572091 Phaseolus vulgaris
Phvul.001G104500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26557141-26567140 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
122307316 5265 Fabidae View MSA
124061279 5270 Rosid View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.7349 0.0 170.127 High High
cufflinks 31.3996 0.0 115.264    
cufflinks 25.3468 0.0 92.742    
cufflinks 26.6872 0.0 97.9336    
cufflinks 27.633 0.0 97.853    
cufflinks 20.3456 0.0 65.1181   Low
cufflinks 22.2818 0.0 85.229    
cufflinks 19.241 0.0 70.438   Low
cufflinks 23.1154 0.0 84.1166    
cufflinks 31.7123 0.0 116.985    
cufflinks 24.3923 0.0 86.0515    

0 Strain