Gene : Phvul.001G096400 P. vulgaris v2.1
Defline:  (1 of 1) K11364 - SAGA-associated factor 29 (SGF29) Genomic Order:  936
Name:  ? Phvul.001G096400 Secondary Identifier:  ? PAC:37170400
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G096400 0.5kb upstream 0.5kb upstream 6660 true Chr01: 18369433-18376092 Phaseolus vulgaris
Phvul.001G096400 0.5kb upstream 0.5kb upstream 500 false Chr01: 18369433-18369932 Phaseolus vulgaris
Phvul.001G096400 0.5kb downstream 0.5kb downstream 6660 true Chr01: 18369933-18376592 Phaseolus vulgaris
Phvul.001G096400 0.5kb downstream 0.5kb downstream 500 false Chr01: 18376093-18376592 Phaseolus vulgaris
Phvul.001G096400 1.0kb upstream 1.0kb upstream 7160 true Chr01: 18368933-18376092 Phaseolus vulgaris
Phvul.001G096400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 18368933-18369932 Phaseolus vulgaris
Phvul.001G096400 1.0kb downstream 1.0kb downstream 7160 true Chr01: 18369933-18377092 Phaseolus vulgaris
Phvul.001G096400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 18376093-18377092 Phaseolus vulgaris
Phvul.001G096400 2.0kb upstream 2.0kb upstream 8160 true Chr01: 18367933-18376092 Phaseolus vulgaris
Phvul.001G096400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 18367933-18369932 Phaseolus vulgaris
Phvul.001G096400 2.0kb downstream 2.0kb downstream 8160 true Chr01: 18369933-18378092 Phaseolus vulgaris
Phvul.001G096400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 18376093-18378092 Phaseolus vulgaris
Phvul.001G096400 5.0kb upstream 5.0kb upstream 11160 true Chr01: 18364933-18376092 Phaseolus vulgaris
Phvul.001G096400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 18364933-18369932 Phaseolus vulgaris
Phvul.001G096400 5.0kb downstream 5.0kb downstream 11160 true Chr01: 18369933-18381092 Phaseolus vulgaris
Phvul.001G096400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 18376093-18381092 Phaseolus vulgaris
Phvul.001G096400 10.0kb upstream 10.0kb upstream 16160 true Chr01: 18359933-18376092 Phaseolus vulgaris
Phvul.001G096400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 18359933-18369932 Phaseolus vulgaris
Phvul.001G096400 10.0kb downstream 10.0kb downstream 16160 true Chr01: 18369933-18386092 Phaseolus vulgaris
Phvul.001G096400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 18376093-18386092 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306199 5265 Fabidae View MSA
124061243 5270 Rosid View MSA
123747151 5271 Pentapetalae View MSA
122789901 5272 Eudicot View MSA
122042873 5273 Angiosperm View MSA
121345271 5274 Embryophyte View MSA
123380184 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.3025 0.0 41.8086   High
cufflinks 9.39408 0.0 26.8316    
cufflinks 7.73932 0.0 22.5098    
cufflinks 6.79171 0.0 20.2271    
cufflinks 5.61796 0.0 17.2031   Low
cufflinks 6.07197 0.0 18.1655   Low
cufflinks 11.2033 0.0 31.4045    
cufflinks 10.851 0.0 30.4682    
cufflinks 7.62235 0.0 22.1776    
cufflinks 9.64146 0.0 27.5516    
cufflinks 8.7218 0.0 25.2271    

0 Strain