Gene : Phvul.001G083200 P. vulgaris v2.1

Defline:  (1 of 9) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  810
Name:  ? Phvul.001G083200 Secondary Identifier:  ? PAC:37169838

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G083200 0.5kb upstream 0.5kb upstream 2492 true Chr01: 12657241-12659732 Phaseolus vulgaris
Phvul.001G083200 0.5kb upstream 0.5kb upstream 500 false Chr01: 12657241-12657740 Phaseolus vulgaris
Phvul.001G083200 0.5kb downstream 0.5kb downstream 2492 true Chr01: 12657741-12660232 Phaseolus vulgaris
Phvul.001G083200 0.5kb downstream 0.5kb downstream 500 false Chr01: 12659733-12660232 Phaseolus vulgaris
Phvul.001G083200 1.0kb upstream 1.0kb upstream 2992 true Chr01: 12656741-12659732 Phaseolus vulgaris
Phvul.001G083200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12656741-12657740 Phaseolus vulgaris
Phvul.001G083200 1.0kb downstream 1.0kb downstream 2992 true Chr01: 12657741-12660732 Phaseolus vulgaris
Phvul.001G083200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12659733-12660732 Phaseolus vulgaris
Phvul.001G083200 2.0kb upstream 2.0kb upstream 3992 true Chr01: 12655741-12659732 Phaseolus vulgaris
Phvul.001G083200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12655741-12657740 Phaseolus vulgaris
Phvul.001G083200 2.0kb downstream 2.0kb downstream 3992 true Chr01: 12657741-12661732 Phaseolus vulgaris
Phvul.001G083200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12659733-12661732 Phaseolus vulgaris
Phvul.001G083200 5.0kb upstream 5.0kb upstream 6992 true Chr01: 12652741-12659732 Phaseolus vulgaris
Phvul.001G083200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12652741-12657740 Phaseolus vulgaris
Phvul.001G083200 5.0kb downstream 5.0kb downstream 6992 true Chr01: 12657741-12664732 Phaseolus vulgaris
Phvul.001G083200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12659733-12664732 Phaseolus vulgaris
Phvul.001G083200 10.0kb upstream 10.0kb upstream 11992 true Chr01: 12647741-12659732 Phaseolus vulgaris
Phvul.001G083200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12647741-12657740 Phaseolus vulgaris
Phvul.001G083200 10.0kb downstream 10.0kb downstream 11992 true Chr01: 12657741-12669732 Phaseolus vulgaris
Phvul.001G083200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12659733-12669732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302800 5265 Fabidae View MSA
124061570 5270 Rosid View MSA
123747864 5271 Pentapetalae View MSA
122792718 5272 Eudicot View MSA
122051174 5273 Angiosperm View MSA
121347879 5274 Embryophyte View MSA
123380662 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.65317 0.0 10.8964   Low
cufflinks 6.03322 0.0 17.0445    
cufflinks 3.93485 0.0 11.6537   Low
cufflinks 4.69705 0.0 13.4613    
cufflinks 5.46746 0.0 15.4718    
cufflinks 5.61319 0.0 15.9869    
cufflinks 5.77971 0.0 16.2763    
cufflinks 5.7234 0.0 16.2347    
cufflinks 5.29842 0.0 15.0813    
cufflinks 6.12344 0.0 17.2423    
cufflinks 5.30333 0.0 15.082    

0 Strain