Gene : Phvul.001G063900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31752:SF8 - AUXIN EFFLUX CARRIER COMPONENT 6-RELATED Genomic Order:  647
Name:  ? Phvul.001G063900 Secondary Identifier:  ? PAC:37169371
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G063900 0.5kb upstream 0.5kb upstream 8070 true Chr01: 7760034-7768103 Phaseolus vulgaris
Phvul.001G063900 0.5kb upstream 0.5kb upstream 500 false Chr01: 7760034-7760533 Phaseolus vulgaris
Phvul.001G063900 0.5kb downstream 0.5kb downstream 8070 true Chr01: 7760534-7768603 Phaseolus vulgaris
Phvul.001G063900 0.5kb downstream 0.5kb downstream 500 false Chr01: 7768104-7768603 Phaseolus vulgaris
Phvul.001G063900 1.0kb upstream 1.0kb upstream 8570 true Chr01: 7759534-7768103 Phaseolus vulgaris
Phvul.001G063900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7759534-7760533 Phaseolus vulgaris
Phvul.001G063900 1.0kb downstream 1.0kb downstream 8570 true Chr01: 7760534-7769103 Phaseolus vulgaris
Phvul.001G063900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7768104-7769103 Phaseolus vulgaris
Phvul.001G063900 2.0kb upstream 2.0kb upstream 9570 true Chr01: 7758534-7768103 Phaseolus vulgaris
Phvul.001G063900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7758534-7760533 Phaseolus vulgaris
Phvul.001G063900 2.0kb downstream 2.0kb downstream 9570 true Chr01: 7760534-7770103 Phaseolus vulgaris
Phvul.001G063900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7768104-7770103 Phaseolus vulgaris
Phvul.001G063900 5.0kb upstream 5.0kb upstream 12570 true Chr01: 7755534-7768103 Phaseolus vulgaris
Phvul.001G063900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7755534-7760533 Phaseolus vulgaris
Phvul.001G063900 5.0kb downstream 5.0kb downstream 12570 true Chr01: 7760534-7773103 Phaseolus vulgaris
Phvul.001G063900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7768104-7773103 Phaseolus vulgaris
Phvul.001G063900 10.0kb upstream 10.0kb upstream 17570 true Chr01: 7750534-7768103 Phaseolus vulgaris
Phvul.001G063900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7750534-7760533 Phaseolus vulgaris
Phvul.001G063900 10.0kb downstream 10.0kb downstream 17570 true Chr01: 7760534-7778103 Phaseolus vulgaris
Phvul.001G063900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7768104-7778103 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306166 5265 Fabidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.59581 0.0 7.13522    
cufflinks 2.25468 0.0 8.57298    
cufflinks 1.42898 0.0 6.42993    
cufflinks 3.56047 0.0 11.9078    
cufflinks 3.68216 0.0 14.6279    
cufflinks 3.00476 0.0 12.8212    
cufflinks 0.974781 0.0 3.5509    
cufflinks 0.550645 0.0 2.38994    
cufflinks 0.66482 0.0 2.7524    
cufflinks 0.0590734 0.0 0.251681 Low Low
cufflinks 4.12486 0.0 13.4395    

0 Strain