Gene : Phvul.001G066400 P. vulgaris v2.1
Defline:  (1 of 3) PF00069//PF07645//PF13947 - Protein kinase domain (Pkinase) // Calcium-binding EGF domain (EGF_CA) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  670
Name:  ? Phvul.001G066400 Secondary Identifier:  ? PAC:37168888
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G066400 0.5kb upstream 0.5kb upstream 3614 true Chr01: 8315536-8319149 Phaseolus vulgaris
Phvul.001G066400 0.5kb upstream 0.5kb upstream 500 false Chr01: 8315536-8316035 Phaseolus vulgaris
Phvul.001G066400 0.5kb downstream 0.5kb downstream 3614 true Chr01: 8316036-8319649 Phaseolus vulgaris
Phvul.001G066400 0.5kb downstream 0.5kb downstream 500 false Chr01: 8319150-8319649 Phaseolus vulgaris
Phvul.001G066400 1.0kb upstream 1.0kb upstream 4114 true Chr01: 8315036-8319149 Phaseolus vulgaris
Phvul.001G066400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8315036-8316035 Phaseolus vulgaris
Phvul.001G066400 1.0kb downstream 1.0kb downstream 4114 true Chr01: 8316036-8320149 Phaseolus vulgaris
Phvul.001G066400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8319150-8320149 Phaseolus vulgaris
Phvul.001G066400 2.0kb upstream 2.0kb upstream 5114 true Chr01: 8314036-8319149 Phaseolus vulgaris
Phvul.001G066400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8314036-8316035 Phaseolus vulgaris
Phvul.001G066400 2.0kb downstream 2.0kb downstream 5114 true Chr01: 8316036-8321149 Phaseolus vulgaris
Phvul.001G066400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8319150-8321149 Phaseolus vulgaris
Phvul.001G066400 5.0kb upstream 5.0kb upstream 8114 true Chr01: 8311036-8319149 Phaseolus vulgaris
Phvul.001G066400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8311036-8316035 Phaseolus vulgaris
Phvul.001G066400 5.0kb downstream 5.0kb downstream 8114 true Chr01: 8316036-8324149 Phaseolus vulgaris
Phvul.001G066400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8319150-8324149 Phaseolus vulgaris
Phvul.001G066400 10.0kb upstream 10.0kb upstream 13114 true Chr01: 8306036-8319149 Phaseolus vulgaris
Phvul.001G066400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8306036-8316035 Phaseolus vulgaris
Phvul.001G066400 10.0kb downstream 10.0kb downstream 13114 true Chr01: 8316036-8329149 Phaseolus vulgaris
Phvul.001G066400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8319150-8329149 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315140 5265 Fabidae View MSA
124072250 5270 Rosid View MSA
123752135 5271 Pentapetalae View MSA
122797292 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.181786 0.0 0.711314 Low  
cufflinks 0.0684417 0.0 0.290062 Low  
cufflinks 6.40875E-4 0.0 0.00720664 Low Low
cufflinks 0.170429 0.0 0.673278 Low  
cufflinks 2.09686E-4 0.0 0.00411258 Low Low
cufflinks 0.0751207 0.0 0.315622 Low  
cufflinks 0.161433 0.0 0.636975 Low  
cufflinks 0.0163974 0.0 0.0798395 Low  
cufflinks 0.00388442 0.0 0.022617 Low  
cufflinks 0.0466618 0.0 0.205243 Low  
cufflinks 0.0762197 0.0 0.321123 Low  

0 Strain