Gene : Phvul.001G068200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11945:SF97 - FLORAL HOMEOTIC PROTEIN PISTILLATA Genomic Order:  687
Name:  ? Phvul.001G068200 Secondary Identifier:  ? PAC:37167822
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G068200 0.5kb upstream 0.5kb upstream 2956 true Chr01: 8718537-8721492 Phaseolus vulgaris
Phvul.001G068200 0.5kb upstream 0.5kb upstream 500 false Chr01: 8718537-8719036 Phaseolus vulgaris
Phvul.001G068200 0.5kb downstream 0.5kb downstream 2956 true Chr01: 8719037-8721992 Phaseolus vulgaris
Phvul.001G068200 0.5kb downstream 0.5kb downstream 500 false Chr01: 8721493-8721992 Phaseolus vulgaris
Phvul.001G068200 1.0kb upstream 1.0kb upstream 3456 true Chr01: 8718037-8721492 Phaseolus vulgaris
Phvul.001G068200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8718037-8719036 Phaseolus vulgaris
Phvul.001G068200 1.0kb downstream 1.0kb downstream 3456 true Chr01: 8719037-8722492 Phaseolus vulgaris
Phvul.001G068200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8721493-8722492 Phaseolus vulgaris
Phvul.001G068200 2.0kb upstream 2.0kb upstream 4456 true Chr01: 8717037-8721492 Phaseolus vulgaris
Phvul.001G068200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8717037-8719036 Phaseolus vulgaris
Phvul.001G068200 2.0kb downstream 2.0kb downstream 4456 true Chr01: 8719037-8723492 Phaseolus vulgaris
Phvul.001G068200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8721493-8723492 Phaseolus vulgaris
Phvul.001G068200 5.0kb upstream 5.0kb upstream 7456 true Chr01: 8714037-8721492 Phaseolus vulgaris
Phvul.001G068200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8714037-8719036 Phaseolus vulgaris
Phvul.001G068200 5.0kb downstream 5.0kb downstream 7456 true Chr01: 8719037-8726492 Phaseolus vulgaris
Phvul.001G068200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8721493-8726492 Phaseolus vulgaris
Phvul.001G068200 10.0kb upstream 10.0kb upstream 12456 true Chr01: 8709037-8721492 Phaseolus vulgaris
Phvul.001G068200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8709037-8719036 Phaseolus vulgaris
Phvul.001G068200 10.0kb downstream 10.0kb downstream 12456 true Chr01: 8719037-8731492 Phaseolus vulgaris
Phvul.001G068200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8721493-8731492 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311902 5265 Fabidae View MSA
124070458 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.958 0.0 311.606 High High
cufflinks 0.391485 0.0 1.52668 Low  
cufflinks 0.467345 0.0 1.79722 Low  
cufflinks 166.561 0.0 466.41 High High
cufflinks 0.219505 0.0 0.903381 Low  
cufflinks 2.95119 0.0 9.46089    
cufflinks 0.0317934 0.0 0.155709 Low Low
cufflinks 0.0236349 0.0 0.119669 Low Low
cufflinks 0.0684825 0.0 0.309437 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.953414 0.0 3.46528    

0 Strain