Gene : Phvul.001G057300 P. vulgaris v2.1
Defline:  (1 of 14) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  580
Name:  ? Phvul.001G057300 Secondary Identifier:  ? PAC:37167802
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G057300 0.5kb upstream 0.5kb upstream 3642 true Chr01: 6506819-6510460 Phaseolus vulgaris
Phvul.001G057300 0.5kb upstream 0.5kb upstream 500 false Chr01: 6506819-6507318 Phaseolus vulgaris
Phvul.001G057300 0.5kb downstream 0.5kb downstream 3642 true Chr01: 6507319-6510960 Phaseolus vulgaris
Phvul.001G057300 0.5kb downstream 0.5kb downstream 500 false Chr01: 6510461-6510960 Phaseolus vulgaris
Phvul.001G057300 1.0kb upstream 1.0kb upstream 4142 true Chr01: 6506319-6510460 Phaseolus vulgaris
Phvul.001G057300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6506319-6507318 Phaseolus vulgaris
Phvul.001G057300 1.0kb downstream 1.0kb downstream 4142 true Chr01: 6507319-6511460 Phaseolus vulgaris
Phvul.001G057300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6510461-6511460 Phaseolus vulgaris
Phvul.001G057300 2.0kb upstream 2.0kb upstream 5142 true Chr01: 6505319-6510460 Phaseolus vulgaris
Phvul.001G057300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6505319-6507318 Phaseolus vulgaris
Phvul.001G057300 2.0kb downstream 2.0kb downstream 5142 true Chr01: 6507319-6512460 Phaseolus vulgaris
Phvul.001G057300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6510461-6512460 Phaseolus vulgaris
Phvul.001G057300 5.0kb upstream 5.0kb upstream 8142 true Chr01: 6502319-6510460 Phaseolus vulgaris
Phvul.001G057300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6502319-6507318 Phaseolus vulgaris
Phvul.001G057300 5.0kb downstream 5.0kb downstream 8142 true Chr01: 6507319-6515460 Phaseolus vulgaris
Phvul.001G057300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6510461-6515460 Phaseolus vulgaris
Phvul.001G057300 10.0kb upstream 10.0kb upstream 13142 true Chr01: 6497319-6510460 Phaseolus vulgaris
Phvul.001G057300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6497319-6507318 Phaseolus vulgaris
Phvul.001G057300 10.0kb downstream 10.0kb downstream 13142 true Chr01: 6507319-6520460 Phaseolus vulgaris
Phvul.001G057300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6510461-6520460 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
122299842 5265 Fabidae View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.719 0.0 311.411 High High
cufflinks 39.1581 0.0 101.631 High  
cufflinks 33.1124 0.0 86.3443    
cufflinks 106.683 0.0 282.175 High High
cufflinks 34.9836 0.0 91.2146 High  
cufflinks 33.697 0.0 87.9115 High  
cufflinks 32.2497 0.0 84.3601 High  
cufflinks 43.1313 0.0 111.656 High  
cufflinks 30.2434 0.0 79.4508 High  
cufflinks 38.9778 0.0 101.194 High  
cufflinks 49.0508 0.0 126.863 High  

0 Strain