Gene : Phvul.001G050800 P. vulgaris v2.1
Genomic Order:  512 Name:  ? Phvul.001G050800
Secondary Identifier:  ? PAC:37169313
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G050800 0.5kb upstream 0.5kb upstream 3673 true Chr01: 5496452-5500124 Phaseolus vulgaris
Phvul.001G050800 0.5kb upstream 0.5kb upstream 500 false Chr01: 5499625-5500124 Phaseolus vulgaris
Phvul.001G050800 0.5kb downstream 0.5kb downstream 3673 true Chr01: 5495952-5499624 Phaseolus vulgaris
Phvul.001G050800 0.5kb downstream 0.5kb downstream 500 false Chr01: 5495952-5496451 Phaseolus vulgaris
Phvul.001G050800 1.0kb upstream 1.0kb upstream 4173 true Chr01: 5496452-5500624 Phaseolus vulgaris
Phvul.001G050800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5499625-5500624 Phaseolus vulgaris
Phvul.001G050800 1.0kb downstream 1.0kb downstream 4173 true Chr01: 5495452-5499624 Phaseolus vulgaris
Phvul.001G050800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5495452-5496451 Phaseolus vulgaris
Phvul.001G050800 2.0kb upstream 2.0kb upstream 5173 true Chr01: 5496452-5501624 Phaseolus vulgaris
Phvul.001G050800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5499625-5501624 Phaseolus vulgaris
Phvul.001G050800 2.0kb downstream 2.0kb downstream 5173 true Chr01: 5494452-5499624 Phaseolus vulgaris
Phvul.001G050800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5494452-5496451 Phaseolus vulgaris
Phvul.001G050800 5.0kb upstream 5.0kb upstream 8173 true Chr01: 5496452-5504624 Phaseolus vulgaris
Phvul.001G050800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5499625-5504624 Phaseolus vulgaris
Phvul.001G050800 5.0kb downstream 5.0kb downstream 8173 true Chr01: 5491452-5499624 Phaseolus vulgaris
Phvul.001G050800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5491452-5496451 Phaseolus vulgaris
Phvul.001G050800 10.0kb upstream 10.0kb upstream 13173 true Chr01: 5496452-5509624 Phaseolus vulgaris
Phvul.001G050800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5499625-5509624 Phaseolus vulgaris
Phvul.001G050800 10.0kb downstream 10.0kb downstream 13173 true Chr01: 5486452-5499624 Phaseolus vulgaris
Phvul.001G050800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5486452-5496451 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314513 5265 Fabidae View MSA
124068722 5270 Rosid View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.38047 0.0 23.1818    
cufflinks 7.39844 0.0 26.1471   High
cufflinks 4.86036 0.0 19.4036    
cufflinks 6.57033 0.0 23.7039    
cufflinks 6.52667 0.0 23.7942    
cufflinks 6.00415 0.0 22.2955    
cufflinks 6.37146 0.0 23.246    
cufflinks 3.02616 0.0 13.4399   Low
cufflinks 4.61451 0.0 18.7683    
cufflinks 3.58456 0.0 15.3838   Low
cufflinks 6.70657 0.0 24.3737    

0 Strain