Gene : Phvul.001G172600 P. vulgaris v2.1
Defline:  (1 of 3) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Genomic Order:  1704
Name:  ? Phvul.001G172600 Secondary Identifier:  ? PAC:37170115
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G172600 0.5kb upstream 0.5kb upstream 3676 true Chr01: 42962361-42966036 Phaseolus vulgaris
Phvul.001G172600 0.5kb upstream 0.5kb upstream 500 false Chr01: 42962361-42962860 Phaseolus vulgaris
Phvul.001G172600 0.5kb downstream 0.5kb downstream 3676 true Chr01: 42962861-42966536 Phaseolus vulgaris
Phvul.001G172600 0.5kb downstream 0.5kb downstream 500 false Chr01: 42966037-42966536 Phaseolus vulgaris
Phvul.001G172600 1.0kb upstream 1.0kb upstream 4176 true Chr01: 42961861-42966036 Phaseolus vulgaris
Phvul.001G172600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42961861-42962860 Phaseolus vulgaris
Phvul.001G172600 1.0kb downstream 1.0kb downstream 4176 true Chr01: 42962861-42967036 Phaseolus vulgaris
Phvul.001G172600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42966037-42967036 Phaseolus vulgaris
Phvul.001G172600 2.0kb upstream 2.0kb upstream 5176 true Chr01: 42960861-42966036 Phaseolus vulgaris
Phvul.001G172600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42960861-42962860 Phaseolus vulgaris
Phvul.001G172600 2.0kb downstream 2.0kb downstream 5176 true Chr01: 42962861-42968036 Phaseolus vulgaris
Phvul.001G172600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42966037-42968036 Phaseolus vulgaris
Phvul.001G172600 5.0kb upstream 5.0kb upstream 8176 true Chr01: 42957861-42966036 Phaseolus vulgaris
Phvul.001G172600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42957861-42962860 Phaseolus vulgaris
Phvul.001G172600 5.0kb downstream 5.0kb downstream 8176 true Chr01: 42962861-42971036 Phaseolus vulgaris
Phvul.001G172600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42966037-42971036 Phaseolus vulgaris
Phvul.001G172600 10.0kb upstream 10.0kb upstream 13176 true Chr01: 42952861-42966036 Phaseolus vulgaris
Phvul.001G172600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42952861-42962860 Phaseolus vulgaris
Phvul.001G172600 10.0kb downstream 10.0kb downstream 13176 true Chr01: 42962861-42976036 Phaseolus vulgaris
Phvul.001G172600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42966037-42976036 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314387 5265 Fabidae View MSA
124062846 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 101.457 0.0 386.997 High  
cufflinks 96.0142 0.0 360.645 High  
cufflinks 107.477 0.0 413.929 High  
cufflinks 86.8117 0.0 317.213 High Low
cufflinks 132.589 0.0 540.287 High High
cufflinks 85.0931 0.0 311.117 High Low
cufflinks 92.9651 0.0 353.662 High  
cufflinks 86.5725 0.0 321.132 High Low
cufflinks 107.414 0.0 421.204 High  
cufflinks 118.605 0.0 468.786 High High
cufflinks 117.089 0.0 466.317 High  

0 Strain