Gene : Phvul.001G175700 P. vulgaris v2.1
Defline:  (1 of 2) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  1736
Name:  ? Phvul.001G175700 Secondary Identifier:  ? PAC:37170275
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G175700 0.5kb upstream 0.5kb upstream 2715 true Chr01: 43239717-43242431 Phaseolus vulgaris
Phvul.001G175700 0.5kb upstream 0.5kb upstream 500 false Chr01: 43241932-43242431 Phaseolus vulgaris
Phvul.001G175700 0.5kb downstream 0.5kb downstream 2715 true Chr01: 43239217-43241931 Phaseolus vulgaris
Phvul.001G175700 0.5kb downstream 0.5kb downstream 500 false Chr01: 43239217-43239716 Phaseolus vulgaris
Phvul.001G175700 1.0kb upstream 1.0kb upstream 3215 true Chr01: 43239717-43242931 Phaseolus vulgaris
Phvul.001G175700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43241932-43242931 Phaseolus vulgaris
Phvul.001G175700 1.0kb downstream 1.0kb downstream 3215 true Chr01: 43238717-43241931 Phaseolus vulgaris
Phvul.001G175700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43238717-43239716 Phaseolus vulgaris
Phvul.001G175700 2.0kb upstream 2.0kb upstream 4215 true Chr01: 43239717-43243931 Phaseolus vulgaris
Phvul.001G175700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43241932-43243931 Phaseolus vulgaris
Phvul.001G175700 2.0kb downstream 2.0kb downstream 4215 true Chr01: 43237717-43241931 Phaseolus vulgaris
Phvul.001G175700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43237717-43239716 Phaseolus vulgaris
Phvul.001G175700 5.0kb upstream 5.0kb upstream 7215 true Chr01: 43239717-43246931 Phaseolus vulgaris
Phvul.001G175700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43241932-43246931 Phaseolus vulgaris
Phvul.001G175700 5.0kb downstream 5.0kb downstream 7215 true Chr01: 43234717-43241931 Phaseolus vulgaris
Phvul.001G175700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43234717-43239716 Phaseolus vulgaris
Phvul.001G175700 10.0kb upstream 10.0kb upstream 12215 true Chr01: 43239717-43251931 Phaseolus vulgaris
Phvul.001G175700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43241932-43251931 Phaseolus vulgaris
Phvul.001G175700 10.0kb downstream 10.0kb downstream 12215 true Chr01: 43229717-43241931 Phaseolus vulgaris
Phvul.001G175700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43229717-43239716 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314911 5265 Fabidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.0538 0.0 105.024 High  
cufflinks 65.265 0.0 170.046 High High
cufflinks 36.5223 0.0 98.5759    
cufflinks 72.6453 0.0 188.718 High High
cufflinks 42.9425 0.0 114.958 High  
cufflinks 33.6479 0.0 91.6058 High  
cufflinks 37.61 0.0 101.321 High  
cufflinks 51.1274 0.0 134.68 High  
cufflinks 39.1425 0.0 105.396 High  
cufflinks 26.1644 0.0 72.9466   Low
cufflinks 51.8129 0.0 136.782 High  

0 Strain