Gene : Phvul.001G177800 P. vulgaris v2.1
Defline:  (1 of 6) K10775 - phenylalanine ammonia-lyase (E4.3.1.24) Genomic Order:  1757
Name:  ? Phvul.001G177800 Secondary Identifier:  ? PAC:37168683
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1121 Phaseolus vulgaris pathologic  
Pvulgaris PWY1F-467 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7186 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G177800 0.5kb upstream 0.5kb upstream 4149 true Chr01: 43488028-43492176 Phaseolus vulgaris
Phvul.001G177800 0.5kb upstream 0.5kb upstream 500 false Chr01: 43488028-43488527 Phaseolus vulgaris
Phvul.001G177800 0.5kb downstream 0.5kb downstream 4149 true Chr01: 43488528-43492676 Phaseolus vulgaris
Phvul.001G177800 0.5kb downstream 0.5kb downstream 500 false Chr01: 43492177-43492676 Phaseolus vulgaris
Phvul.001G177800 1.0kb upstream 1.0kb upstream 4649 true Chr01: 43487528-43492176 Phaseolus vulgaris
Phvul.001G177800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 43487528-43488527 Phaseolus vulgaris
Phvul.001G177800 1.0kb downstream 1.0kb downstream 4649 true Chr01: 43488528-43493176 Phaseolus vulgaris
Phvul.001G177800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 43492177-43493176 Phaseolus vulgaris
Phvul.001G177800 2.0kb upstream 2.0kb upstream 5649 true Chr01: 43486528-43492176 Phaseolus vulgaris
Phvul.001G177800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 43486528-43488527 Phaseolus vulgaris
Phvul.001G177800 2.0kb downstream 2.0kb downstream 5649 true Chr01: 43488528-43494176 Phaseolus vulgaris
Phvul.001G177800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 43492177-43494176 Phaseolus vulgaris
Phvul.001G177800 5.0kb upstream 5.0kb upstream 8649 true Chr01: 43483528-43492176 Phaseolus vulgaris
Phvul.001G177800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 43483528-43488527 Phaseolus vulgaris
Phvul.001G177800 5.0kb downstream 5.0kb downstream 8649 true Chr01: 43488528-43497176 Phaseolus vulgaris
Phvul.001G177800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 43492177-43497176 Phaseolus vulgaris
Phvul.001G177800 10.0kb upstream 10.0kb upstream 13649 true Chr01: 43478528-43492176 Phaseolus vulgaris
Phvul.001G177800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43478528-43488527 Phaseolus vulgaris
Phvul.001G177800 10.0kb downstream 10.0kb downstream 13649 true Chr01: 43488528-43502176 Phaseolus vulgaris
Phvul.001G177800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 43492177-43502176 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1877 0.0 54.8149    
cufflinks 12.3496 0.0 32.123    
cufflinks 3.02616 0.0 8.7954   Low
cufflinks 10.3797 0.0 27.2302    
cufflinks 39.6598 0.0 105.354 High  
cufflinks 16.2237 0.0 41.9568    
cufflinks 81.0879 0.0 231.782 High High
cufflinks 34.4735 0.0 90.852 High  
cufflinks 96.9097 0.0 283.783 High High
cufflinks 29.532 0.0 77.1935    
cufflinks 48.6454 0.0 131.513 High  

0 Strain